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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
44
target gene predictions
36
chromatin state
accessible chromatin
6
binding sites
5
histone modifications
2
eQTL
Date released
98
September, 2022
46
February, 2021
5
May, 2021
3
August, 2017
3
February, 2024
3
November, 2021
2
January, 2022
1
March, 2020
1
October, 2022
Available data
127
bed bed3+
33
bed bed9
tsv
Organism
162
Homo sapiens
Biosample type
129
tissue
30
cell line
3
primary cell
Organ
413
epithelium
357
brain
351
kidney
334
musculature of body
307
connective tissue
295
lung
265
intestine
207
limb
205
bodily fluid
200
heart
194
blood
193
embryo
189
skin of body
166
vasculature
162
large intestine
137
extraembryonic component
136
pancreas
131
blood vessel
109
stomach
104
liver
81
small intestine
80
mammary gland
78
uterus
72
prostate gland
70
bone element
69
placenta
65
adrenal gland
61
penis
60
adipose tissue
60
ureter
54
lymph node
48
artery
48
eye
47
thymus
43
gonad
39
esophagus
36
spinal cord
31
spleen
23
testis
21
lymphoid tissue
20
ovary
20
thyroid gland
20
vein
17
mouth
16
nerve
13
bronchus
12
lymphatic vessel
12
pituitary gland
11
bone marrow
11
breast
10
skeleton
vagina
8
tongue
8
urinary bladder
4
trachea
3
nose
1
pericardium
Project
159
AMP
3
ENCODE
Genome assembly (visualization)
160
hg19
40
GRCh38
organ_slims!
vagina
files.file_type!
tsv
annotation_type!
accessible chromatin
BIOSAMPLE
TYPE
162 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
eQTL
tissue
large intestine
27
14
13
1
sigmoid colon
10
7
5
transverse colon
8
5
4
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 5 more…
cell line
HT-29
2
2
1
1
1
HCT116
2
3
1
SW480
2
1
1
1
1
HCT-116 cell
1
2
RKO
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
See all biosamples
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