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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
44
target gene predictions
36
chromatin state
10
accessible chromatin
5
binding sites
5
histone modifications
2
eQTL
Date released
98
September, 2022
46
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
3
February, 2024
2
January, 2022
1
March, 2020
October, 2022
Available data
136
bed bed3+
33
bed bed9
3
bigWig
tsv
Organism
171
Homo sapiens
Biosample type
132
tissue
33
cell line
6
primary cell
Organ
619
epithelium
399
kidney
393
brain
383
connective tissue
358
musculature of body
306
lung
285
intestine
227
limb
226
heart
204
embryo
201
pancreas
198
bodily fluid
198
skin of body
198
vasculature
187
blood
171
large intestine
155
blood vessel
145
extraembryonic component
127
liver
117
stomach
105
eye
84
bone element
84
mammary gland
84
small intestine
80
uterus
77
prostate gland
72
adrenal gland
72
placenta
67
adipose tissue
64
ureter
62
penis
60
lymph node
58
artery
49
thymus
47
gonad
43
esophagus
37
spinal cord
33
spleen
24
testis
23
lymphoid tissue
22
ovary
22
thyroid gland
21
vein
19
nerve
18
mouth
18
skeleton
16
bronchus
16
lymphatic vessel
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
vagina
5
trachea
4
nose
1
pericardium
Project
165
AMP
6
ENCODE
Genome assembly (visualization)
169
hg19
43
GRCh38
organ_slims!
vagina
files.file_type!
tsv
month_released!
October, 2022
BIOSAMPLE
TYPE
171 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
tissue
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 5 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
RKO
1
1
1
1
HCT-116 cell
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
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