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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
60
accessible chromatin
45
target gene predictions
35
gene expression
33
differential activity
14
candidate regulatory elements
11
variant allelic effects
8
histone modifications
7
binding sites
7
chromatin state
Date released
41
March, 2023
37
November, 2021
30
May, 2021
25
September, 2022
24
February, 2021
20
February, 2024
20
January, 2021
7
August, 2018
5
June, 2020
5
October, 2019
1
February, 2023
1
June, 2021
1
March, 2020
1
May, 2020
1
November, 2019
1
October, 2022
Available data
143
bed bed3+
59
tsv
52
bigWig
14
bigBed narrowPeak
7
bed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
220
Homo sapiens
Biosample type
tissue
149
primary cell
68
cell line
3
in vitro differentiated cells
Organ
888
epithelium
365
connective tissue
351
kidney
214
bodily fluid
204
blood
182
vasculature
180
embryo
179
skin of body
163
pancreas
130
lung
120
blood vessel
117
brain
98
liver
85
mammary gland
70
uterus
69
musculature of body
67
bone element
63
prostate gland
62
lymph node
62
penis
57
intestine
48
extraembryonic component
41
heart
40
large intestine
39
eye
33
artery
22
vein
21
lymphatic vessel
16
bronchus
13
bone marrow
13
placenta
11
adrenal gland
11
gonad
11
stomach
10
esophagus
10
pituitary gland
8
limb
8
mouth
8
testis
7
spinal cord
6
lymphoid tissue
5
adipose tissue
5
trachea
4
nose
4
small intestine
3
thyroid gland
2
ovary
1
pericardium
1
thymus
Project
161
AMP
37
ENCODE
20
T1D
2
community
Genome assembly (visualization)
152
hg19
52
GRCh38
organ_slims!
vagina
biosample_type!
tissue
BIOSAMPLE
TYPE
220 results
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Clear Filters
accessible chromatin
target gene predictions
gene expression
differential activity
candidate regulatory elements
variant allelic effects
histone modifications
binding sites
chromatin state
primary cell
pancreatic ductal cell
6
3
3
3
1
2
1
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
4
3
3
1
+ See 19 more…
cell line
EndoC_BH1
8
1
8
3
1
HT-29
1
2
2
1
1
1
SW480
1
1
2
1
1
1
HCT116
3
2
1
Panc1
2
2
1
+ See 9 more…
in vitro differentiated cells
pancreatic ductal cell
3
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