Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
63
accessible chromatin
44
target gene predictions
24
candidate regulatory elements
11
variant allelic effects
6
histone modifications
5
binding sites
4
chromatin state
1
eQTL
1
sQTL
Date released
31
September, 2022
24
February, 2021
20
February, 2024
20
January, 2021
18
November, 2021
15
May, 2021
6
May, 2020
6
October, 2019
4
June, 2020
4
March, 2020
3
August, 2017
3
January, 2020
2
November, 2019
1
April, 2019
1
August, 2021
1
June, 2021
Available data
159
bed bed3+
76
tsv
57
bigWig
14
bigBed narrowPeak
13
bed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
159
Homo sapiens
Biosample type
70
primary cell
69
tissue
20
cell line
Organ
547
epithelium
330
connective tissue
309
brain
309
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
limb
173
heart
165
skin of body
163
vasculature
159
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
101
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
vagina
5
trachea
3
nose
Project
121
AMP
20
T1D
18
ENCODE
Genome assembly (visualization)
159
hg19
40
GRCh38
organ_slims!
vagina
ureter
BIOSAMPLE
TYPE
159 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
variant allelic effects
histone modifications
binding sites
chromatin state
eQTL
sQTL
primary cell
pancreatic beta cell
8
3
1
pancreatic ductal cell
5
3
1
2
1
pancreatic alpha cell
7
3
1
pancreatic delta cell
5
4
1
pancreatic acinar cell
5
3
1
+ See 6 more…
tissue
pancreas
5
5
5
1
1
1
1
islet of Langerhans
6
1
1
1
2
3
1
1
body of pancreas
5
8
1
endocrine pancreas
4
7
pancreatic ductal cell
2
+ See 6 more…
cell line
EndoC_BH1
8
1
1
Panc1
2
2
8988T
1
1
HPDE6-E6E7
1
1
pancreatic acinar cell
1
+ See 1 more…
See all biosamples
Download