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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
23
candidate regulatory elements
21
target gene predictions
19
gene expression
accessible chromatin
17
chromatin state
14
histone modifications
8
eQTL
7
binding sites
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
1
differential activity
Date released
46
September, 2022
25
February, 2021
10
August, 2021
10
February, 2024
10
March, 2020
3
August, 2017
3
May, 2020
3
May, 2021
2
February, 2020
1
January, 2020
1
January, 2022
1
July, 2020
1
May, 2022
1
November, 2021
1
October, 2022
Available data
71
bed bed3+
20
tsv
14
bed bed9
5
bigWig
3
csv
1
bam
1
bigBed bed9
Organism
118
Homo sapiens
Biosample type
54
tissue
32
primary cell
25
cell line
7
in vitro differentiated cells
Organ
735
epithelium
600
kidney
423
brain
372
connective tissue
346
musculature of body
295
lung
265
intestine
229
heart
vasculature
223
limb
212
pancreas
205
bodily fluid
203
embryo
194
blood
189
skin of body
177
blood vessel
162
large intestine
137
extraembryonic component
132
liver
109
stomach
82
adipose tissue
81
small intestine
80
mammary gland
78
uterus
74
bone element
72
prostate gland
69
placenta
65
adrenal gland
64
artery
61
penis
60
ureter
54
lymph node
50
eye
47
thymus
43
gonad
41
spinal cord
39
esophagus
31
spleen
23
testis
22
nerve
21
lymphoid tissue
20
ovary
20
thyroid gland
20
vein
17
lymphatic vessel
17
mouth
13
bronchus
12
pituitary gland
11
bone marrow
11
breast
10
skeleton
9
vagina
8
tongue
8
urinary bladder
4
trachea
3
nose
1
pericardium
Project
117
AMP
1
ENCODE
Genome assembly (visualization)
94
hg19
32
GRCh38
2
hg18
organ_slims!
vasculature
annotation_type!
accessible chromatin
month_released!
March, 2024
BIOSAMPLE
TYPE
118 results
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Clear Filters
candidate regulatory elements
target gene predictions
gene expression
chromatin state
histone modifications
eQTL
binding sites
variant allelic effects
Fine-mapped variants
caQTL
differential activity
tissue
liver
13
10
1
9
2
7
1
1
1
right lobe of liver
2
1
1
1
1
3
primary cell
hepatocyte
1
3
13
1
4
1
2
hepatic stellate cell
1
1
1
1
1
1
Liver fetal (hepatocyte)
1
cell line
HepG2
2
3
2
5
3
HuH-7
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
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