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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
23
candidate regulatory elements
21
target gene predictions
19
gene expression
18
accessible chromatin
17
chromatin state
histone modifications
8
eQTL
7
binding sites
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
1
differential activity
Date released
42
September, 2022
19
February, 2021
15
February, 2024
10
March, 2020
7
August, 2021
5
June, 2020
3
August, 2017
3
January, 2020
3
May, 2020
3
May, 2021
3
November, 2021
2
February, 2020
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
1
October, 2022
1
September, 2018
Available data
75
bed bed3+
20
tsv
17
bigWig
14
bed bed9
3
csv
1
bam
1
bigBed bed9
Organism
122
Homo sapiens
Biosample type
56
tissue
38
primary cell
21
cell line
7
in vitro differentiated cells
Organ
921
epithelium
646
kidney
433
connective tissue
418
brain
368
musculature of body
307
lung
281
intestine
271
pancreas
vasculature
249
heart
242
limb
204
embryo
198
blood vessel
193
bodily fluid
191
skin of body
183
blood
169
large intestine
142
liver
141
extraembryonic component
118
stomach
105
eye
88
adipose tissue
84
small intestine
83
bone element
82
mammary gland
81
uterus
73
adrenal gland
71
prostate gland
70
artery
70
placenta
64
ureter
59
penis
58
lymph node
49
gonad
48
thymus
45
esophagus
43
spinal cord
34
spleen
25
nerve
25
testis
23
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
20
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
breast
12
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
119
AMP
3
ENCODE
Genome assembly (visualization)
98
hg19
37
GRCh38
2
hg18
organ_slims!
vasculature
annotation_type!
histone modifications
BIOSAMPLE
TYPE
122 results
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Clear Filters
candidate regulatory elements
target gene predictions
gene expression
accessible chromatin
chromatin state
eQTL
binding sites
variant allelic effects
Fine-mapped variants
caQTL
differential activity
tissue
liver
13
10
1
4
9
7
1
1
1
right lobe of liver
2
1
1
1
1
3
primary cell
hepatocyte
1
3
13
8
1
1
2
hepatic stellate cell
1
1
1
3
1
1
Liver fetal (hepatocyte)
1
cell line
HepG2
2
3
2
2
3
HuH-7
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
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