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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1621
candidate regulatory elements
1326
target gene predictions
969
histone modifications
911
chromatin state
877
accessible chromatin
796
binding sites
647
gene expression
163
eQTL
149
differential activity
125
variant allelic effects
65
Fine-mapped variants
10
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
809
September, 2022
63
March, 2020
34
August, 2017
34
May, 2022
8
April, 2019
8
May, 2019
5
February, 2024
5
May, 2021
3
October, 2019
2
January, 2020
2
March, 2023
2
May, 2020
1
November, 2019
Available data
837
bed bed9
63
tsv
39
bed bed3+
34
bed bed9+
32
bigBed bed9
1
bam
1
bigWig
Organism
976
Homo sapiens
Biosample type
560
tissue
191
cell line
180
primary cell
44
in vitro differentiated cells
1
stem cell
Organ
108
brain
80
musculature of body
77
kidney
71
lung
60
heart
59
intestine
59
limb
54
connective tissue
53
epithelium
vasculature
37
blood vessel
36
large intestine
35
skin of body
33
extraembryonic component
28
embryo
27
bodily fluid
25
blood
24
stomach
22
pancreas
20
liver
20
small intestine
16
adipose tissue
16
placenta
15
bone element
15
mammary gland
14
adrenal gland
14
artery
13
prostate gland
13
ureter
11
spinal cord
11
thymus
10
penis
9
eye
8
gonad
8
lymph node
7
esophagus
7
nerve
6
spleen
5
lymphoid tissue
5
vein
4
mouth
4
ovary
4
testis
4
thyroid gland
4
uterus
3
skeleton
2
bone marrow
2
breast
2
bronchus
2
lymphatic vessel
2
tongue
2
urinary bladder
2
vagina
1
nose
Project
976
AMP
Genome assembly (visualization)
974
hg19
900
GRCh38
organ_slims!
vasculature
BIOSAMPLE
TYPE
976 results
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Clear Filters
chromatin state
Fine-mapped variants
tissue
heart
21
stomach
19
brain
18
kidney
16
lung
16
+ See 113 more…
cell line
A549
18
K562
7
MCF-7
5
HeLa-S3
3
endometrium adenocarcinoma
3
+ See 143 more…
primary cell
common myeloid progenitor, CD34-positive
13
CD4-positive, alpha-beta memory T cell
9
B cell
8
CD8-positive, alpha-beta memory T cell
7
mature neutrophil
7
+ See 72 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
10
adipocyte
6
embryonic stem cell
5
neural progenitor cell
4
endodermal cell
2
+ See 15 more…
stem cell
H1-hESC
1
See all biosamples
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