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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1621
candidate regulatory elements
1326
target gene predictions
969
histone modifications
911
chromatin state
877
accessible chromatin
796
binding sites
647
gene expression
165
eQTL
149
differential activity
125
variant allelic effects
65
Fine-mapped variants
10
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
283
June, 2020
217
November, 2021
55
January, 2020
53
May, 2020
45
February, 2024
44
November, 2022
31
August, 2021
29
May, 2021
28
January, 2021
24
February, 2023
16
April, 2020
14
May, 2022
10
February, 2021
9
November, 2019
9
October, 2019
4
January, 2022
4
September, 2022
3
September, 2018
2
November, 2020
1
June, 2021
1
March, 2023
Available data
868
bed bed3+
502
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
837
Homo sapiens
Biosample type
462
primary cell
191
tissue
161
cell line
68
in vitro differentiated cells
Organ
212
epithelium
88
connective tissue
67
pancreas
59
eye
50
kidney
42
brain
vasculature
27
musculature of body
26
blood vessel
26
heart
24
liver
21
intestine
20
limb
15
bone element
15
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
11
artery
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
620
AMP
217
ENCODE
29
T1D
16
LungMap
Genome assembly (visualization)
872
hg19
367
GRCh38
organ_slims!
vasculature
BIOSAMPLE
TYPE
882 results
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Clear Filters
accessible chromatin
sQTL
primary cell
monocyte
18
1
fibroblast
16
endothelial cell
15
excitatory neuron
12
macrophage
12
+ See 205 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
islet of Langerhans
6
2
heart
5
+ See 91 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 146 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 29 more…
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