Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1578
candidate regulatory elements
1271
target gene predictions
945
histone modifications
886
chromatin state
865
accessible chromatin
751
binding sites
647
gene expression
163
eQTL
149
differential activity
125
variant allelic effects
65
Fine-mapped variants
10
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
271
June, 2020
217
November, 2021
119
May, 2020
99
February, 2024
55
January, 2020
44
November, 2022
30
August, 2021
28
January, 2021
26
May, 2021
25
February, 2023
16
April, 2020
14
May, 2022
11
February, 2021
9
November, 2019
9
October, 2019
4
January, 2022
4
September, 2022
3
October, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
966
bed bed3+
506
bigWig
13
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
944
Homo sapiens
Biosample type
530
primary cell
231
tissue
154
cell line
74
in vitro differentiated cells
Organ
253
epithelium
104
connective tissue
76
pancreas
66
kidney
61
eye
59
brain
vasculature
36
heart
35
blood vessel
34
musculature of body
28
limb
28
liver
24
intestine
16
lung
15
artery
15
bone element
14
skin of body
blood
12
bodily fluid
12
embryo
10
adipose tissue
10
large intestine
10
stomach
9
extraembryonic component
8
adrenal gland
8
lymph node
8
mammary gland
8
skeleton
7
ureter
6
esophagus
6
prostate gland
5
gonad
5
nerve
4
bronchus
4
lymphatic vessel
4
placenta
3
penis
3
small intestine
3
thyroid gland
3
uterus
3
vein
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
727
AMP
217
ENCODE
30
T1D
16
LungMap
Genome assembly (visualization)
968
hg19
367
GRCh38
organ_slims!
vasculature
blood
BIOSAMPLE
TYPE
990 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
variant allelic effects
primary cell
fibroblast
16
6
monocyte
18
endothelial cell
15
2
macrophage
12
3
excitatory neuron
12
+ See 214 more…
tissue
retina
23
1
pigmented layer of retina
20
kidney
10
1
heart
5
2
islet of Langerhans
6
1
+ See 96 more…
cell line
EndoC_BH1
8
1
HepG2
2
MIN6
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
+ See 136 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 33 more…
See all biosamples
Download