Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
998
candidate regulatory elements
570
target gene predictions
539
chromatin state
257
accessible chromatin
182
histone modifications
179
gene expression
109
eQTL
73
binding sites
65
Fine-mapped variants
48
variant allelic effects
4
differential activity
4
variant to gene
3
pQTL
2
sQTL
1
caQTL
1
other
1
representative DNase hypersensitivity sites
Date released
1452
September, 2022
819
February, 2021
103
March, 2020
82
June, 2020
76
August, 2021
69
May, 2021
60
May, 2020
58
January, 2020
57
February, 2024
56
January, 2022
45
February, 2020
35
November, 2022
27
March, 2024
24
February, 2023
23
August, 2017
9
November, 2019
8
April, 2019
8
May, 2019
6
March, 2023
5
October, 2019
4
September, 2023
3
September, 2018
2
January, 2018
2
May, 2022
1
August, 2020
1
August, 2022
Available data
2148
bed bed3+
510
bed bed9
269
tsv
124
bigWig
30
bigBed bed9
24
csv
1
bam
Organism
3034
Homo sapiens
Biosample type
2568
tissue
2341
cell line
2300
primary cell
468
in vitro differentiated cells
4
stem cell
Organ
353
brain
308
musculature of body
302
kidney
236
limb
232
intestine
215
heart
181
lung
145
connective tissue
134
large intestine
117
pancreas
108
stomach
103
extraembryonic component
87
epithelium
vasculature
85
adipose tissue
84
blood vessel
80
small intestine
76
eye
65
embryo
65
liver
64
ureter
62
adrenal gland
60
placenta
48
thymus
42
artery
39
gonad
36
spinal cord
35
esophagus
34
skin of body
34
spleen
25
nerve
22
bone element
21
ovary
20
thyroid gland
18
lymphoid tissue
18
skeleton
18
testis
15
prostate gland
13
breast
13
uterus
11
mouth
10
tongue
10
urinary bladder
10
vagina
8
penis
5
mammary gland
4
bodily fluid
4
nose
3
blood
3
pituitary gland
2
lymphatic vessel
1
vein
Project
3031
AMP
5
ITG
Genome assembly (visualization)
2769
hg19
760
GRCh38
3
hg18
organ_slims!
vasculature
BIOSAMPLE
TYPE
3036 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
gene expression
eQTL
binding sites
Fine-mapped variants
variant allelic effects
differential activity
variant to gene
pQTL
sQTL
caQTL
other
representative DNase hypersensitivity sites
tissue
heart
37
20
21
5
1
3
1
2
stomach
40
21
19
3
1
1
1
kidney
29
14
16
10
2
7
1
1
1
brain
29
16
18
2
3
1
2
1
1
lung
33
17
16
1
1
+ See 252 more…
in vitro differentiated cells
neural progenitor cell
5
5
4
10
15
7
hematopoietic multipotent progenitor cell
19
10
10
1
1
1
1
adipocyte
4
6
6
4
1
1
1
embryonic stem cell
1
5
6
1
1
cardiomyocytes
11
+ See 120 more…
See all biosamples
Download