Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
458
accessible chromatin
448
gene expression
347
target gene predictions
275
candidate regulatory elements
205
histone modifications
174
chromatin state
135
differential activity
80
binding sites
72
variant allelic effects
eQTL
9
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
424
September, 2022
409
February, 2021
327
November, 2021
250
May, 2021
246
September, 2023
131
February, 2024
78
May, 2020
56
January, 2021
51
March, 2023
49
June, 2020
41
August, 2021
40
May, 2022
25
October, 2022
16
April, 2020
14
February, 2020
14
January, 2020
9
August, 2018
9
November, 2022
7
October, 2019
5
August, 2017
4
March, 2020
3
November, 2020
2
February, 2023
2
January, 2022
1
July, 2020
1
June, 2021
1
March, 2024
Available data
1451
bed bed3+
544
tsv
388
bigWig
142
bed bed9
106
txt
27
bed bed9+
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
2170
Homo sapiens
Biosample type
2457
tissue
2316
cell line
2215
primary cell
462
in vitro differentiated cells
4
stem cell
Organ
818
epithelium
309
kidney
277
connective tissue
vasculature
126
pancreas
114
blood vessel
100
skin of body
63
liver
48
musculature of body
46
mammary gland
penis
40
extraembryonic component
35
brain
34
lung
31
heart
29
artery
23
eye
23
intestine
22
embryo
20
vein
17
lymphatic vessel
16
bronchus
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
mouth
4
small intestine
4
spinal cord
3
gonad
3
thyroid gland
2
ovary
1
adipose tissue
1
limb
1
pericardium
1
thymus
Project
1567
AMP
327
ENCODE
246
KPMP
59
T1D
16
LungMap
Genome assembly (visualization)
1635
hg19
619
GRCh38
organ_slims!
vasculature
penis
annotation_type!
eQTL
BIOSAMPLE
TYPE
2215 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
gene expression
target gene predictions
candidate regulatory elements
histone modifications
chromatin state
differential activity
binding sites
variant allelic effects
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
18
15
2
86
1
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
4
3
5
7
30
1
B cell
6
2
10
14
8
endothelial cell
15
9
7
1
2
2
2
+ See 410 more…
See all biosamples
Download