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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
527
accessible chromatin
522
gene expression
419
target gene predictions
375
candidate regulatory elements
301
histone modifications
224
chromatin state
135
differential activity
121
binding sites
78
variant allelic effects
46
eQTL
9
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
1
representative DNase hypersensitivity sites
Date released
616
February, 2021
547
September, 2022
327
November, 2021
293
May, 2021
250
September, 2023
168
February, 2024
85
May, 2020
73
August, 2021
70
June, 2020
56
January, 2021
51
March, 2023
40
January, 2022
40
May, 2022
27
November, 2022
27
October, 2022
17
January, 2020
16
April, 2020
14
February, 2020
14
March, 2020
9
August, 2017
9
August, 2018
9
October, 2019
3
November, 2020
2
February, 2023
2
May, 2024
2
November, 2019
1
July, 2020
1
June, 2021
1
March, 2024
Available data
1836
bed bed3+
621
tsv
400
bigWig
188
bed bed9
106
txt
27
bed bed9+
24
csv
16
bigBed narrowPeak
7
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
2725
Homo sapiens
Biosample type
2568
tissue
2341
cell line
2302
primary cell
468
in vitro differentiated cells
4
stem cell
Organ
845
epithelium
333
connective tissue
310
kidney
vasculature
129
pancreas
114
blood vessel
109
skin of body
70
liver
52
embryo
52
musculature of body
49
mammary gland
47
penis
45
extraembryonic component
39
brain
34
lung
32
heart
29
artery
29
eye
23
intestine
20
vein
19
lymphatic vessel
16
bronchus
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
nose
4
small intestine
4
spinal cord
3
thyroid gland
2
adipose tissue
2
ovary
1
limb
1
pericardium
1
testis
1
thymus
Project
2120
AMP
327
ENCODE
246
KPMP
59
T1D
16
LungMap
2
community
Genome assembly (visualization)
2070
hg19
725
GRCh38
organ_slims!
vasculature
BIOSAMPLE
TYPE
2770 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
candidate regulatory elements
histone modifications
chromatin state
differential activity
binding sites
variant allelic effects
eQTL
caQTL
hQTL
meQTL
sQTL
other
representative DNase hypersensitivity sites
primary cell
monocyte
18
15
2
86
1
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
4
3
5
7
30
1
B cell
6
2
10
14
8
endothelial cell
15
9
7
1
2
2
1
2
+ See 419 more…
in vitro differentiated cells
neural progenitor cell
10
7
5
5
15
4
hematopoietic multipotent progenitor cell
1
1
10
19
1
10
1
adipocyte
4
1
6
4
1
6
1
embryonic stem cell
6
1
1
5
1
cardiomyocytes
11
+ See 120 more…
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