Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
458
accessible chromatin
448
gene expression
353
target gene predictions
294
candidate regulatory elements
205
histone modifications
179
chromatin state
135
differential activity
82
binding sites
72
variant allelic effects
46
eQTL
9
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
439
September, 2022
423
February, 2021
327
November, 2021
254
May, 2021
246
September, 2023
136
February, 2024
78
May, 2020
56
January, 2021
51
March, 2023
49
June, 2020
42
August, 2021
40
May, 2022
37
January, 2022
27
October, 2022
16
April, 2020
14
February, 2020
14
January, 2020
9
August, 2018
9
November, 2022
7
October, 2019
5
August, 2017
4
March, 2020
3
November, 2020
2
February, 2023
2
May, 2024
1
July, 2020
1
June, 2021
1
March, 2024
Available data
1483
bed bed3+
546
tsv
388
bigWig
147
bed bed9
106
txt
27
bed bed9+
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
2248
Homo sapiens
Biosample type
2557
tissue
2337
cell line
2293
primary cell
468
in vitro differentiated cells
4
stem cell
Organ
819
epithelium
309
kidney
283
connective tissue
vasculature
126
pancreas
114
blood vessel
100
skin of body
63
liver
50
musculature of body
46
mammary gland
41
penis
40
extraembryonic component
35
brain
34
lung
31
heart
29
artery
23
eye
23
intestine
22
embryo
20
vein
17
lymphatic vessel
16
bronchus
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
trachea
5
uterus
4
gonad
mouth
4
small intestine
4
spinal cord
3
thyroid gland
2
ovary
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
1643
AMP
327
ENCODE
246
KPMP
59
T1D
16
LungMap
2
community
Genome assembly (visualization)
1676
hg19
659
GRCh38
organ_slims!
vasculature
trachea
mouth
BIOSAMPLE
TYPE
2293 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
gene expression
target gene predictions
candidate regulatory elements
histone modifications
chromatin state
differential activity
binding sites
variant allelic effects
eQTL
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
18
15
2
86
1
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
4
3
5
7
30
1
B cell
6
2
10
14
8
endothelial cell
15
9
7
1
2
2
1
2
+ See 417 more…
See all biosamples
Download