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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1621
candidate regulatory elements
1326
target gene predictions
969
histone modifications
877
accessible chromatin
796
binding sites
141
eQTL
125
variant allelic effects
74
chromatin state
41
gene expression
10
caQTL
9
differential activity
5
hQTL
5
sQTL
3
meQTL
3
other
3
pQTL
2
Fine-mapped variants
2
variant to gene
Date released
2367
February, 2021
1627
September, 2022
327
November, 2021
299
February, 2024
293
May, 2021
283
June, 2020
138
May, 2020
103
January, 2022
97
October, 2022
79
August, 2021
56
January, 2020
56
January, 2021
49
May, 2022
46
March, 2020
44
November, 2022
34
August, 2017
27
February, 2023
16
April, 2020
15
February, 2020
13
March, 2023
10
November, 2019
9
August, 2018
9
October, 2019
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5760
bed bed3+
bed bed9
tsv
515
bigWig
106
txt
34
bed bed9+
32
bigBed bed9
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5965
Homo sapiens
Biosample type
2141
cell line
1904
tissue
1608
primary cell
353
in vitro differentiated cells
4
stem cell
Organ
575
epithelium
354
connective tissue
333
brain
324
kidney
290
musculature of body
240
lung
231
intestine
192
bodily fluid
188
pancreas
183
blood
180
heart
178
embryo
177
limb
vasculature
168
skin of body
139
large intestine
130
blood vessel
114
liver
113
extraembryonic component
98
eye
94
stomach
77
uterus
73
mammary gland
71
bone element
65
small intestine
64
prostate gland
59
adipose tissue
58
adrenal gland
57
placenta
54
lymph node
54
penis
51
artery
51
ureter
40
gonad
38
thymus
36
esophagus
30
spinal cord
27
spleen
21
testis
18
lymphoid tissue
18
ovary
18
thyroid gland
18
vein
15
nerve
15
skeleton
14
bronchus
14
lymphatic vessel
14
mouth
12
bone marrow
12
pituitary gland
10
breast
7
tongue
7
urinary bladder
7
vagina
5
trachea
3
nose
1
pericardium
Project
5595
AMP
327
ENCODE
60
T1D
16
LungMap
9
community
5
ITG
Genome assembly (visualization)
5839
hg19
862
GRCh38
4
hg18
organ_slims!
vasculature
files.file_type!
bed bed9
tsv
BIOSAMPLE
TYPE
6012 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
eQTL
variant allelic effects
chromatin state
gene expression
caQTL
differential activity
hQTL
sQTL
meQTL
other
pQTL
Fine-mapped variants
variant to gene
cell line
HeLa-S3
5
55
1
A549
21
19
1
1
2
H1-hESC
1
39
1
1
2
K562
7
23
1
1
2
1
MCF-7
9
6
2
1
3
+ See 757 more…
tissue
heart
37
20
1
5
1
2
stomach
40
21
1
3
1
kidney
29
14
2
10
1
1
1
brain
29
16
3
2
1
2
1
lung
33
17
1
+ See 223 more…
primary cell
monocyte
2
86
18
1
4
2
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
1
common myeloid progenitor, CD34-positive
27
14
endothelial cell
7
1
15
2
1
2
1
2
B cell
14
10
6
+ See 321 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
4
1
4
embryonic stem cell
1
1
6
1
mesenchymal stem cell
3
3
1
1
1
+ See 105 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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