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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
189
candidate regulatory elements
149
target gene predictions
105
accessible chromatin
105
chromatin state
34
binding sites
32
histone modifications
16
variant allelic effects
11
eQTL
6
Fine-mapped variants
2
gene expression
2
pQTL
1
caQTL
Date released
278
September, 2022
154
February, 2021
69
November, 2021
29
June, 2020
22
February, 2024
19
May, 2021
11
August, 2017
11
March, 2020
11
October, 2022
8
August, 2021
7
May, 2020
7
November, 2022
6
January, 2020
3
April, 2020
3
May, 2022
2
February, 2020
2
January, 2021
2
November, 2020
2
October, 2019
2
September, 2018
2
September, 2023
1
June, 2021
Available data
541
bed bed3+
94
bed bed9
63
bigWig
8
tsv
2
bigBed bed9
1
bigBed narrowPeak
Organism
652
Homo sapiens
Biosample type
298
tissue
240
primary cell
65
cell line
48
in vitro differentiated cells
1
stem cell
Organ
600
epithelium
423
brain
387
connective tissue
387
kidney
367
musculature of body
309
lung
283
intestine
237
limb
229
heart
217
bodily fluid
206
blood
205
embryo
vasculature
199
skin of body
186
pancreas
170
large intestine
159
blood vessel
145
extraembryonic component
124
liver
116
stomach
107
eye
87
mammary gland
85
bone element
83
small intestine
80
uterus
76
prostate gland
72
placenta
71
adrenal gland
69
adipose tissue
64
penis
64
ureter
62
lymph node
60
artery
49
thymus
45
gonad
41
spinal cord
40
esophagus
32
spleen
23
lymphoid tissue
23
testis
22
nerve
21
ovary
21
thyroid gland
21
vein
18
skeleton
17
mouth
16
bronchus
16
lymphatic vessel
13
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
Project
574
AMP
69
ENCODE
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
652
hg19
195
GRCh38
2
hg18
organ_slims!
vasculature
BIOSAMPLE
TYPE
652 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
binding sites
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
gene expression
pQTL
caQTL
tissue
small intestine
29
17
1
15
large intestine
27
14
1
13
1
adipose tissue
7
8
2
6
1
1
3
sigmoid colon
10
7
1
5
transverse colon
8
5
1
4
+ See 20 more…
primary cell
fibroblast
4
16
1
6
pericyte cell
1
10
10
1
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
4
2
osteoblast
2
2
5
1
3
2
+ See 36 more…
cell line
HT-29
2
2
1
1
1
1
GM23248
2
1
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
fibroblast of cardiac tissue
2
1
2
+ See 15 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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