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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
133
target gene predictions
123
candidate regulatory elements
96
accessible chromatin
74
binding sites
73
chromatin state
49
gene expression
49
histone modifications
23
eQTL
14
differential activity
14
variant allelic effects
6
Fine-mapped variants
3
pQTL
1
caQTL
Date released
189
September, 2022
179
February, 2021
50
November, 2021
46
February, 2024
31
June, 2020
29
October, 2022
20
May, 2021
17
September, 2023
14
August, 2021
9
August, 2017
9
February, 2020
9
March, 2020
8
May, 2020
7
January, 2020
7
March, 2023
7
November, 2022
6
January, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
January, 2018
1
June, 2021
Available data
503
bed bed3+
65
tsv
64
bed bed9
52
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
658
Homo sapiens
Biosample type
273
primary cell
236
cell line
98
tissue
50
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
582
AMP
50
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
586
hg19
169
GRCh38
2
hg18
organ_slims!
vasculature
BIOSAMPLE
TYPE
658 results
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Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
binding sites
chromatin state
gene expression
histone modifications
eQTL
differential activity
variant allelic effects
Fine-mapped variants
pQTL
caQTL
primary cell
fibroblast
4
16
1
2
6
pericyte cell
10
1
10
1
osteoblast
2
2
5
3
1
2
2
fibroblast of lung
4
6
2
4
foreskin fibroblast
2
6
1
4
1
2
+ See 43 more…
cell line
K562
23
7
1
2
7
1
GM12878
8
2
1
2
2
1
GM06990
1
2
1
2
1
1
GM19240
2
1
1
2
1
1
HAP-1
2
2
1
1
1
1
+ See 38 more…
tissue
adipose tissue
8
7
2
1
6
3
4
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
omental fat pad
2
5
2
2
2
2
3
subcutaneous abdominal adipose tissue
5
1
cartilage tissue
1
2
2
+ See 8 more…
in vitro differentiated cells
adipocyte
6
4
4
1
6
1
1
mesenchymal stem cell
3
3
1
1
2
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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