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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
23
candidate regulatory elements
21
target gene predictions
19
gene expression
18
accessible chromatin
17
chromatin state
14
histone modifications
8
eQTL
7
binding sites
3
Fine-mapped variants
1
caQTL
1
differential activity
1
variant allelic effects
Date released
46
September, 2022
26
February, 2021
15
February, 2024
10
August, 2021
10
March, 2020
5
June, 2020
3
August, 2017
3
January, 2020
May, 2020
3
May, 2021
3
November, 2021
2
February, 2020
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
1
October, 2022
1
September, 2018
Available data
87
bed bed3+
20
tsv
17
bigWig
14
bed bed9
3
csv
1
bam
1
bigBed bed9
Organism
133
Homo sapiens
Biosample type
58
tissue
40
primary cell
28
cell line
7
in vitro differentiated cells
Organ
934
epithelium
633
kidney
448
connective tissue
447
brain
370
musculature of body
311
lung
289
intestine
271
pancreas
vasculature
244
heart
234
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
193
blood vessel
174
large intestine
153
liver
146
extraembryonic component
119
stomach
107
eye
88
bone element
87
mammary gland
86
adipose tissue
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
70
artery
64
penis
62
lymph node
61
ureter
50
gonad
48
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
22
nerve
21
lymphatic vessel
21
vein
19
mouth
18
skeleton
16
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
130
AMP
3
ENCODE
Genome assembly (visualization)
110
hg19
44
GRCh38
2
hg18
organ_slims!
vasculature
month_released!
May, 2020
BIOSAMPLE
TYPE
133 results
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Clear Filters
candidate regulatory elements
target gene predictions
gene expression
accessible chromatin
chromatin state
histone modifications
eQTL
binding sites
Fine-mapped variants
caQTL
differential activity
variant allelic effects
tissue
liver
13
10
1
4
9
2
7
1
1
1
right lobe of liver
2
1
1
1
1
3
primary cell
hepatocyte
1
3
13
8
1
4
1
1
hepatic stellate cell
1
1
1
3
1
1
cell line
HepG2
2
3
2
2
5
3
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
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