Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
128
candidate regulatory elements
77
target gene predictions
70
chromatin state
15
accessible chromatin
5
binding sites
4
histone modifications
1
eQTL
1
gene expression
1
variant allelic effects
Date released
207
September, 2022
68
February, 2021
9
November, 2021
6
June, 2020
4
May, 2021
October, 2022
3
April, 2020
1
August, 2017
1
February, 2024
1
January, 2022
1
March, 2020
1
March, 2024
Available data
231
bed bed3+
69
bed bed9
9
bigWig
1
tsv
Organism
302
Homo sapiens
Biosample type
181
tissue
94
cell line
27
primary cell
Organ
943
epithelium
650
kidney
460
brain
448
connective tissue
372
musculature of body
307
lung
288
intestine
277
pancreas
vasculature
255
heart
244
limb
214
embryo
202
blood vessel
200
skin of body
199
bodily fluid
188
blood
173
large intestine
155
liver
145
extraembryonic component
119
stomach
107
eye
89
adipose tissue
88
bone element
84
mammary gland
84
small intestine
82
uterus
78
prostate gland
74
artery
73
adrenal gland
72
placenta
64
ureter
62
penis
lymph node
49
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
25
nerve
25
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
290
AMP
9
ENCODE
3
LungMap
Genome assembly (visualization)
300
hg19
79
GRCh38
organ_slims!
vasculature
lymph node
month_released!
October, 2022
BIOSAMPLE
TYPE
302 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
variant allelic effects
tissue
lung
33
17
16
1
1
left lung
26
13
13
right lung
22
11
11
1
upper lobe of left lung
7
3
3
1
1
1
cell line
A549
21
19
18
1
1
1
IMR-90
2
2
1
1
1
1
PC-9
2
2
1
1
1
1
WI38
5
1
1
NCI-H226 cell
1
1
1
1
+ See 3 more…
primary cell
fibroblast of lung
6
4
4
type II pneumocyte
2
4
1
type I pneumocyte
1
3
endothelial cell of artery
1
lung neuroendocrine cell
1
See all biosamples
Download