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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
103
candidate regulatory elements
91
target gene predictions
89
accessible chromatin
59
chromatin state
50
gene expression
36
binding sites
31
histone modifications
22
eQTL
15
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
pQTL
1
caQTL
Date released
153
September, 2022
134
February, 2021
50
November, 2021
24
June, 2020
19
February, 2024
18
May, 2021
17
September, 2023
11
August, 2021
10
October, 2022
9
February, 2020
9
March, 2020
8
May, 2020
7
August, 2017
7
January, 2020
7
January, 2022
7
March, 2023
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
January, 2018
1
June, 2021
1
March, 2024
Available data
376
bed bed3+
66
tsv
52
bed bed9
52
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
519
Homo sapiens
Biosample type
274
primary cell
110
tissue
84
cell line
50
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
443
AMP
50
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
445
hg19
130
GRCh38
2
hg18
organ_slims!
vasculature
BIOSAMPLE
TYPE
519 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
pQTL
caQTL
primary cell
fibroblast
4
16
1
2
6
pericyte cell
1
10
10
1
osteoblast
2
2
5
1
2
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
4
2
+ See 43 more…
tissue
adipose tissue
7
8
2
6
3
1
4
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
omental fat pad
5
2
2
2
2
2
3
prostate gland
4
2
1
2
2
2
1
subcutaneous abdominal adipose tissue
5
1
+ See 8 more…
cell line
22Rv1
4
2
2
1
1
GM23248
2
1
1
1
1
1
LNCaP clone FGC
3
2
2
PC-3
2
1
1
1
1
1
RWPE1
2
1
1
1
1
1
+ See 17 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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