Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
478
gene expression
475
accessible chromatin
342
target gene predictions
284
candidate regulatory elements
206
histone modifications
152
differential activity
147
chromatin state
92
binding sites
79
variant allelic effects
46
eQTL
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
430
September, 2022
423
February, 2021
323
November, 2021
281
September, 2023
251
May, 2021
151
February, 2024
84
May, 2020
56
January, 2021
55
March, 2023
50
June, 2020
42
August, 2021
37
January, 2022
27
October, 2022
21
January, 2020
19
April, 2020
16
February, 2020
13
May, 2022
9
August, 2018
9
November, 2022
7
October, 2019
4
August, 2017
4
February, 2023
4
March, 2020
3
November, 2020
2
May, 2024
1
July, 2020
1
June, 2021
1
March, 2024
Available data
1497
bed bed3+
591
tsv
404
bigWig
143
bed bed9
108
txt
bed bed9+
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
2279
Homo sapiens
Biosample type
2626
tissue
2324
primary cell
2273
cell line
461
in vitro differentiated cells
4
stem cell
Organ
819
epithelium
309
kidney
283
connective tissue
169
vasculature
126
pancreas
114
blood vessel
skin of body
63
liver
50
musculature of body
46
mammary gland
41
penis
40
extraembryonic component
35
brain
34
lung
31
heart
29
artery
23
eye
23
intestine
22
embryo
vein
17
lymphatic vessel
16
bronchus
13
bone element
12
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
3
thyroid gland
2
ovary
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
1640
AMP
323
ENCODE
281
KPMP
59
T1D
19
LungMap
2
community
Genome assembly (visualization)
1657
hg19
675
GRCh38
organ_slims!
vein
skin of body
files.file_type!
bed bed9+
BIOSAMPLE
TYPE
2324 results
search-icon
table-tab-icon
Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
histone modifications
differential activity
chromatin state
binding sites
variant allelic effects
eQTL
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
15
18
2
86
1
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
3
4
5
7
30
B cell
2
6
10
14
8
endothelial cell
9
15
7
1
2
2
1
2
+ See 432 more…
See all biosamples
Download