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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
72
accessible chromatin
61
gene expression
target gene predictions
43
candidate regulatory elements
35
differential activity
28
eQTL
27
chromatin state
14
variant allelic effects
11
Fine-mapped variants
7
binding sites
7
histone modifications
2
sQTL
2
variant to gene
Date released
52
February, 2021
47
March, 2023
46
September, 2022
27
February, 2024
26
May, 2021
14
August, 2021
12
March, 2020
11
November, 2021
10
January, 2021
9
May, 2020
7
August, 2018
7
February, 2020
7
January, 2020
7
January, 2022
6
October, 2019
5
August, 2017
5
June, 2020
2
January, 2018
2
November, 2019
2
September, 2018
1
April, 2019
1
February, 2023
1
June, 2021
1
November, 2022
Available data
151
bed bed3+
98
tsv
59
bigWig
21
bed bed9
11
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
bigBed bed9
3
csv
3
xls
Organism
309
Homo sapiens
Biosample type
171
tissue
103
primary cell
32
cell line
3
in vitro differentiated cells
Organ
827
epithelium
577
kidney
390
brain
380
connective tissue
295
musculature of body
235
vasculature
233
lung
233
pancreas
216
intestine
206
heart
195
limb
179
blood vessel
161
bodily fluid
160
skin of body
152
blood
135
liver
131
embryo
130
large intestine
110
extraembryonic component
100
eye
89
stomach
76
adipose tissue
73
bone element
68
mammary gland
67
artery
63
prostate gland
61
small intestine
56
placenta
53
lymph node
53
penis
52
adrenal gland
51
ureter
39
gonad
35
esophagus
35
thymus
34
spinal cord
26
spleen
25
uterus
22
nerve
22
testis
19
vein
18
lymphatic vessel
18
lymphoid tissue
17
thyroid gland
16
ovary
15
mouth
15
skeleton
13
bronchus
10
bone marrow
10
breast
8
tongue
8
vagina
7
urinary bladder
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
286
AMP
11
ENCODE
10
T1D
2
community
Genome assembly (visualization)
198
hg19
77
GRCh38
2
hg18
annotation_type!
target gene predictions
BIOSAMPLE
TYPE
309 results
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Clear Filters
accessible chromatin
gene expression
candidate regulatory elements
differential activity
eQTL
chromatin state
variant allelic effects
Fine-mapped variants
binding sites
histone modifications
sQTL
variant to gene
tissue
islet of Langerhans
6
11
13
3
1
2
2
1
2
2
adipose tissue
2
3
7
4
6
1
1
subcutaneous adipose tissue
2
5
2
1
6
1
1
3
body of pancreas
2
8
1
4
1
3
pancreas
5
5
1
3
1
1
1
+ See 12 more…
primary cell
pancreatic ductal cell
6
3
3
1
1
2
pancreatic beta cell
8
3
3
1
pancreatic alpha cell
7
3
3
1
pancreatic acinar cell
6
3
3
1
pancreatic delta cell
5
3
3
1
+ See 11 more…
cell line
EndoC_BH1
8
8
3
1
Panc1
2
1
8988T
1
1
HPDE6-E6E7
1
1
adipose tissue derived mesenchymal stem cell
1
1
+ See 3 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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