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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
72
accessible chromatin
57
target gene predictions
43
candidate regulatory elements
27
chromatin state
25
eQTL
14
variant allelic effects
10
gene expression
7
binding sites
7
histone modifications
2
Fine-mapped variants
2
differential activity
2
sQTL
Date released
68
September, 2022
40
February, 2021
22
February, 2024
20
January, 2021
20
May, 2021
18
November, 2021
14
August, 2021
9
May, 2020
7
August, 2018
7
January, 2022
6
January, 2020
6
March, 2020
6
March, 2023
6
October, 2019
5
August, 2017
5
June, 2020
2
November, 2019
2
September, 2018
1
April, 2019
1
February, 2020
1
June, 2021
1
November, 2022
Available data
208
bed bed3+
tsv
62
bigWig
21
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
bigBed bed9
3
csv
3
xls
Organism
268
Homo sapiens
Biosample type
159
tissue
80
primary cell
28
cell line
1
in vitro differentiated cells
Organ
625
epithelium
401
kidney
399
brain
395
connective tissue
361
musculature of body
310
lung
286
intestine
227
limb
226
heart
217
bodily fluid
206
blood
205
embryo
202
skin of body
202
vasculature
201
pancreas
172
large intestine
157
blood vessel
146
extraembryonic component
128
liver
117
stomach
107
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
73
placenta
72
adrenal gland
67
adipose tissue
64
penis
64
ureter
62
lymph node
59
artery
49
thymus
48
gonad
43
esophagus
38
spinal cord
33
spleen
25
testis
23
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
19
nerve
18
mouth
18
skeleton
16
bronchus
16
lymphatic vessel
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
228
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
243
hg19
72
GRCh38
2
hg18
files.file_type!
tsv
BIOSAMPLE
TYPE
268 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
chromatin state
eQTL
variant allelic effects
gene expression
binding sites
histone modifications
Fine-mapped variants
differential activity
sQTL
tissue
islet of Langerhans
6
1
3
13
1
2
2
1
2
2
adipose tissue
2
8
7
6
4
1
1
pancreas
5
5
5
3
1
1
1
1
body of pancreas
5
8
4
1
endocrine pancreas
4
7
4
+ See 14 more…
primary cell
pancreatic ductal cell
6
3
1
1
1
2
pancreatic beta cell
8
3
1
1
pancreatic alpha cell
7
3
1
1
pancreatic acinar cell
6
3
1
1
pancreatic delta cell
5
4
1
1
+ See 7 more…
cell line
EndoC_BH1
8
1
1
2
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
adipose tissue derived mesenchymal stem cell
1
1
+ See 3 more…
in vitro differentiated cells
white adipose cell
1
See all biosamples
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