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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
112
candidate regulatory elements
99
target gene predictions
68
binding sites
68
chromatin state
55
accessible chromatin
49
gene expression
33
histone modifications
21
eQTL
20
differential activity
18
variant allelic effects
15
Fine-mapped variants
3
caQTL
Date released
168
September, 2022
142
February, 2021
47
February, 2024
35
September, 2023
23
October, 2022
20
January, 2020
20
March, 2020
19
June, 2020
18
May, 2020
10
February, 2020
10
May, 2021
9
August, 2021
6
January, 2022
6
November, 2021
5
August, 2017
4
February, 2023
4
March, 2023
3
April, 2020
3
November, 2019
2
October, 2019
2
September, 2018
1
January, 2018
1
March, 2024
1
May, 2019
1
November, 2022
Available data
393
bed bed3+
86
tsv
63
bed bed9
36
bigWig
9
bigBed bed9
2
txt
Organism
561
Homo sapiens
Biosample type
209
cell line
179
primary cell
170
tissue
3
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
517
AMP
35
KPMP
6
ENCODE
3
LungMap
Genome assembly (visualization)
479
hg19
161
GRCh38
2
hg18
BIOSAMPLE
TYPE
561 results
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Clear Filters
candidate regulatory elements
target gene predictions
binding sites
chromatin state
accessible chromatin
gene expression
histone modifications
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
cell line
K562
7
23
2
7
1
1
GM12878
2
8
2
2
1
1
GM06990
2
1
2
1
1
1
GM19240
1
2
2
1
1
1
HAP-1
2
2
1
1
1
1
+ See 29 more…
primary cell
endothelial cell of umbilical vein
6
4
2
5
2
1
endothelial cell of hepatic sinusoid
6
6
4
dermis blood vessel endothelial cell
6
2
2
fibroblast of pulmonary artery
2
1
2
1
1
1
choroid plexus epithelial cell
2
1
1
1
1
1
+ See 30 more…
tissue
adipose tissue
7
8
1
6
2
3
4
1
coronary artery
3
3
3
3
1
2
2
3
1
subcutaneous adipose tissue
2
1
2
5
6
1
1
3
tibial artery
3
2
3
3
1
2
2
3
omental fat pad
5
2
2
2
2
2
3
+ See 13 more…
in vitro differentiated cells
dermis microvascular lymphatic vessel endothelial cell
1
1
white adipose cell
1
See all biosamples
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