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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
235
candidate regulatory elements
225
gene expression
172
target gene predictions
115
chromatin state
69
accessible chromatin
58
differential activity
22
binding sites
19
variant allelic effects
18
histone modifications
17
eQTL
6
Fine-mapped variants
Date released
330
September, 2022
264
February, 2021
140
September, 2023
54
February, 2024
42
August, 2021
26
June, 2020
22
May, 2020
18
January, 2020
14
February, 2020
12
March, 2020
10
May, 2021
5
November, 2021
4
January, 2022
3
August, 2017
3
October, 2022
2
March, 2024
2
September, 2018
1
April, 2019
1
January, 2018
1
May, 2019
1
November, 2022
Available data
536
bed bed3+
283
tsv
112
bed bed9
87
txt
43
bigWig
3
bigBed bed9
Organism
956
Homo sapiens
Biosample type
420
tissue
332
primary cell
171
cell line
32
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
811
AMP
140
KPMP
5
ENCODE
Genome assembly (visualization)
661
hg19
208
GRCh38
2
hg18
BIOSAMPLE
TYPE
956 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
chromatin state
accessible chromatin
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
tissue
kidney
29
7
14
16
10
1
1
2
1
right kidney
20
10
10
1
1
renal cortex interstitium
20
9
9
1
1
renal pelvis
19
9
9
2
1
left kidney
18
9
9
+ See 29 more…
primary cell
epithelial cell of proximal tubule
2
16
1
1
1
1
1
glomerular endothelial cell
2
14
1
1
2
1
trophoblast cell
7
5
4
1
1
glomerular visceral epithelial cell
2
5
1
1
2
kidney tubule cell
3
1
2
2
2
+ See 68 more…
cell line
H1-hESC
1
8
39
1
1
2
1
H9
7
8
1
HEK293
3
1
1
1
2
1
H7-hESC
1
2
1
1
1
HUES6
2
1
1
1
1
+ See 28 more…
in vitro differentiated cells
endodermal cell
4
2
2
mesodermal cell
4
1
1
1
trophoblast cell
2
2
1
ectodermal cell
2
1
1
cardiac mesoderm primordium
1
1
1
+ See 5 more…
stem cell
H1-hESC
1
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