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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
266
gene expression
219
accessible chromatin
135
target gene predictions
119
candidate regulatory elements
differential activity
63
chromatin state
45
binding sites
44
variant allelic effects
29
histone modifications
16
eQTL
6
Fine-mapped variants
2
caQTL
Date released
219
February, 2021
175
September, 2022
127
November, 2021
93
September, 2023
76
February, 2024
37
May, 2021
29
August, 2021
26
June, 2020
20
January, 2021
18
January, 2020
18
May, 2020
16
November, 2022
14
February, 2020
14
March, 2020
11
February, 2023
9
March, 2023
7
April, 2020
6
August, 2018
6
October, 2022
5
August, 2017
5
October, 2019
3
January, 2022
2
March, 2024
2
May, 2022
2
September, 2018
1
January, 2018
1
July, 2020
1
November, 2019
Available data
596
bed bed3+
254
tsv
181
bigWig
78
txt
58
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
bigBed bed9
3
xls
Organism
944
Homo sapiens
Biosample type
731
primary cell
143
tissue
43
cell line
27
in vitro differentiated cells
Organ
857
epithelium
596
kidney
466
brain
444
connective tissue
374
musculature of body
311
lung
289
intestine
255
heart
248
vasculature
244
limb
244
pancreas
218
bodily fluid
215
embryo
207
blood
204
skin of body
192
blood vessel
174
large intestine
152
liver
146
extraembryonic component
119
stomach
109
eye
89
bone element
87
adipose tissue
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
artery
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
697
AMP
127
ENCODE
93
KPMP
20
T1D
7
LungMap
Genome assembly (visualization)
669
hg19
257
GRCh38
2
hg18
annotation_type!
differential activity
BIOSAMPLE
TYPE
944 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
3
1
1
1
2
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
2
1
+ See 147 more…
tissue
adipose tissue
3
2
8
7
6
1
1
4
pigmented layer of retina
20
subcutaneous adipose tissue
5
2
2
1
1
6
3
omental fat pad
2
2
2
5
2
2
3
breast epithelium
1
3
5
2
+ See 23 more…
cell line
EndoC_BH1
8
8
1
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 8 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 5 more…
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