Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
258
gene expression
210
accessible chromatin
133
target gene predictions
117
candidate regulatory elements
94
differential activity
62
chromatin state
44
variant allelic effects
42
binding sites
27
histone modifications
16
eQTL
6
Fine-mapped variants
2
caQTL
Date released
213
February, 2021
172
September, 2022
155
September, 2023
127
November, 2021
72
February, 2024
38
March, 2023
35
May, 2021
29
August, 2021
23
June, 2020
20
January, 2021
18
January, 2020
18
May, 2020
14
February, 2020
13
March, 2020
12
February, 2023
10
November, 2022
7
April, 2020
6
August, 2018
6
October, 2022
5
August, 2017
5
October, 2019
3
January, 2022
2
March, 2024
2
May, 2022
2
September, 2018
1
January, 2018
1
July, 2020
1
November, 2019
Available data
578
bed bed3+
338
tsv
179
bigWig
78
txt
57
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
bigBed bed9
3
xls
Organism
1011
Homo sapiens
Biosample type
820
primary cell
145
tissue
46
cell line
in vitro differentiated cells
Organ
923
epithelium
651
kidney
462
brain
410
connective tissue
373
musculature of body
311
lung
289
intestine
274
pancreas
264
vasculature
254
heart
244
limb
218
bodily fluid
207
blood
204
blood vessel
195
skin of body
185
embryo
174
large intestine
149
liver
141
extraembryonic component
119
stomach
103
eye
89
bone element
88
adipose tissue
84
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
ureter
62
lymph node
58
penis
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
1
pericardium
Project
700
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
650
hg19
256
GRCh38
2
hg18
biosample_type!
in vitro differentiated cells
BIOSAMPLE
TYPE
1011 results
search-icon
table-tab-icon
Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
variant allelic effects
binding sites
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
3
1
1
2
1
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
1
2
+ See 147 more…
tissue
adipose tissue
3
2
8
7
6
1
1
4
subcutaneous adipose tissue
5
2
2
1
1
1
6
3
pigmented layer of retina
20
omental fat pad
2
2
2
5
2
2
3
breast epithelium
1
3
5
2
+ See 23 more…
cell line
EndoC_BH1
8
8
1
3
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 8 more…
See all biosamples
Download