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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
254
gene expression
211
accessible chromatin
135
target gene predictions
119
candidate regulatory elements
94
differential activity
63
chromatin state
45
binding sites
44
variant allelic effects
26
histone modifications
10
eQTL
6
Fine-mapped variants
2
caQTL
Date released
219
February, 2021
175
September, 2022
155
September, 2023
127
November, 2021
78
February, 2024
38
March, 2023
37
May, 2021
August, 2021
26
June, 2020
20
January, 2021
18
January, 2020
18
May, 2020
16
November, 2022
14
February, 2020
14
March, 2020
12
February, 2023
7
April, 2020
6
August, 2018
6
October, 2022
5
August, 2017
5
October, 2019
3
January, 2022
2
March, 2024
2
May, 2022
2
September, 2018
1
January, 2018
1
July, 2020
1
November, 2019
Available data
584
bed bed3+
334
tsv
173
bigWig
66
txt
58
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
bigBed bed9
3
xls
Organism
1009
Homo sapiens
Biosample type
797
primary cell
139
tissue
46
cell line
27
in vitro differentiated cells
Organ
926
epithelium
624
kidney
466
brain
449
connective tissue
374
musculature of body
311
lung
289
intestine
269
pancreas
265
vasculature
247
heart
244
limb
215
bodily fluid
207
embryo
205
blood
204
skin of body
203
blood vessel
174
large intestine
146
extraembryonic component
146
liver
119
stomach
109
eye
89
bone element
87
mammary gland
84
small intestine
83
adipose tissue
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
698
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
654
hg19
254
GRCh38
month_released!
August, 2021
BIOSAMPLE
TYPE
1009 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
6
14
7
2
2
1
1
2
hepatocyte
13
8
3
1
1
1
2
1
epithelial cell of proximal tubule
15
1
1
2
1
1
1
endothelial cell of umbilical vein
2
4
6
5
2
1
glomerular endothelial cell
13
2
1
2
1
1
+ See 138 more…
tissue
adipose tissue
3
2
8
7
6
1
1
2
pigmented layer of retina
20
subcutaneous adipose tissue
5
2
2
1
1
1
3
3
omental fat pad
2
2
2
5
2
1
3
breast epithelium
1
3
5
2
+ See 23 more…
cell line
EndoC_BH1
8
8
1
3
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 8 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 5 more…
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