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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
235
gene expression
170
accessible chromatin
119
candidate regulatory elements
111
target gene predictions
67
differential activity
63
chromatin state
43
binding sites
37
variant allelic effects
26
histone modifications
16
eQTL
6
Fine-mapped variants
2
caQTL
Date released
211
February, 2021
171
September, 2022
155
September, 2023
110
November, 2021
57
February, 2024
29
August, 2021
25
June, 2020
18
January, 2020
17
May, 2020
16
November, 2022
14
February, 2020
13
March, 2020
12
May, 2021
11
February, 2023
7
April, 2020
6
October, 2022
5
August, 2017
4
March, 2023
3
January, 2022
2
January, 2021
2
March, 2024
2
May, 2022
2
September, 2018
1
January, 2018
1
July, 2020
Available data
513
bed bed3+
296
tsv
136
bigWig
78
txt
58
bed bed9
3
bigBed bed9
3
csv
1
bigBed narrowPeak
Organism
895
Homo sapiens
Biosample type
710
primary cell
138
tissue
24
in vitro differentiated cells
23
cell line
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
621
AMP
155
KPMP
110
ENCODE
7
LungMap
2
T1D
Genome assembly (visualization)
584
hg19
227
GRCh38
2
hg18
organ_slims!
pancreas
BIOSAMPLE
TYPE
895 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
1
3
1
1
2
4
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
2
1
+ See 136 more…
tissue
adipose tissue
3
2
7
8
6
1
1
4
subcutaneous adipose tissue
5
2
2
1
1
1
6
3
pigmented layer of retina
20
omental fat pad
2
2
5
2
2
2
3
breast epithelium
1
5
3
2
+ See 17 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
cell line
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
adipose tissue derived mesenchymal stem cell
1
1
+ See 5 more…
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