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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
267
gene expression
221
accessible chromatin
143
target gene predictions
134
candidate regulatory elements
94
differential activity
69
chromatin state
46
binding sites
44
variant allelic effects
29
histone modifications
17
eQTL
6
Fine-mapped variants
2
caQTL
Date released
229
February, 2021
193
September, 2022
155
September, 2023
127
November, 2021
78
February, 2024
38
March, 2023
38
May, 2021
29
August, 2021
27
June, 2020
20
January, 2021
18
January, 2020
18
May, 2020
16
November, 2022
15
March, 2020
14
February, 2020
12
February, 2023
7
April, 2020
6
August, 2018
6
October, 2022
5
August, 2017
5
October, 2019
4
January, 2022
3
March, 2024
2
May, 2022
2
November, 2019
2
September, 2018
1
January, 2018
1
July, 2020
Available data
622
bed bed3+
347
tsv
182
bigWig
78
txt
64
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
bigBed bed9
3
xls
Organism
1072
Homo sapiens
Biosample type
820
primary cell
179
tissue
46
cell line
27
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
761
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
701
hg19
265
GRCh38
2
hg18
organ_slims!
gonad
BIOSAMPLE
TYPE
1072 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
3
1
1
1
2
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
2
1
+ See 147 more…
tissue
spleen
1
2
8
15
6
1
1
adipose tissue
3
2
8
7
6
1
1
4
subcutaneous adipose tissue
5
2
2
1
1
1
6
3
pigmented layer of retina
20
omental fat pad
2
2
2
5
2
2
3
+ See 24 more…
cell line
EndoC_BH1
8
8
1
3
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 8 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 5 more…
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