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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
268
gene expression
222
accessible chromatin
138
target gene predictions
125
candidate regulatory elements
94
differential activity
67
chromatin state
46
variant allelic effects
45
binding sites
29
histone modifications
18
eQTL
9
Fine-mapped variants
2
caQTL
Date released
222
February, 2021
184
September, 2022
155
September, 2023
127
November, 2021
78
February, 2024
38
March, 2023
37
May, 2021
29
August, 2021
27
June, 2020
21
May, 2020
20
January, 2021
19
January, 2020
17
February, 2020
17
March, 2020
16
November, 2022
12
February, 2023
7
April, 2020
6
August, 2018
6
October, 2022
5
August, 2017
5
October, 2019
4
January, 2022
2
March, 2024
2
May, 2022
2
November, 2019
2
September, 2018
1
January, 2018
1
July, 2020
Available data
610
bed bed3+
352
tsv
183
bigWig
78
txt
62
bed bed9
14
bigBed narrowPeak
6
csv
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1063
Homo sapiens
Biosample type
820
primary cell
170
tissue
46
cell line
27
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
752
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
691
hg19
268
GRCh38
2
hg18
BIOSAMPLE
TYPE
1063 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
variant allelic effects
binding sites
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
3
1
1
2
1
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
1
2
+ See 147 more…
tissue
adipose tissue
3
2
8
7
6
1
1
4
tibial nerve
2
3
3
6
4
2
2
3
subcutaneous adipose tissue
5
2
2
1
1
1
6
3
pigmented layer of retina
20
omental fat pad
2
2
2
5
2
2
3
+ See 24 more…
cell line
EndoC_BH1
8
8
1
3
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 8 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 5 more…
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