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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
73
accessible chromatin
65
candidate regulatory elements
41
target gene predictions
34
chromatin state
20
binding sites
14
eQTL
14
gene expression
10
histone modifications
6
Fine-mapped variants
6
variant allelic effects
2
differential activity
Date released
93
September, 2022
68
February, 2021
24
February, 2023
23
November, 2022
11
June, 2020
10
November, 2021
8
March, 2020
7
February, 2020
6
August, 2021
6
January, 2020
5
May, 2020
5
May, 2021
5
October, 2022
4
February, 2024
3
August, 2017
3
January, 2022
2
September, 2018
1
January, 2018
Available data
220
bed bed3+
44
bigWig
31
bed bed9
24
tsv
1
bigBed bed9
Organism
285
Homo sapiens
Biosample type
156
tissue
70
primary cell
49
cell line
10
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
275
AMP
10
ENCODE
Genome assembly (visualization)
263
hg19
59
GRCh38
2
hg18
BIOSAMPLE
TYPE
285 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
binding sites
eQTL
gene expression
histone modifications
Fine-mapped variants
variant allelic effects
differential activity
tissue
retina
23
6
3
3
1
1
1
1
1
adipose tissue
2
7
8
6
1
4
3
1
subcutaneous adipose tissue
2
2
1
6
5
3
1
1
pigmented layer of retina
20
omental fat pad
2
5
2
2
2
2
3
+ See 8 more…
primary cell
mammary gland epithelial cell
1
3
4
3
1
1
mammary epithelial cell
1
3
1
1
4
retinal pigment epithelial cell
3
2
1
1
2
1
fibroblast of mammary gland
1
2
1
1
2
1
myoepithelial cell of mammary gland
4
2
2
+ See 7 more…
cell line
MCF-7
1
9
6
5
3
2
WERI-Rb-1
1
2
1
1
2
1
T47D
3
2
2
MCF 10A
3
adipose tissue derived mesenchymal stem cell
1
1
+ See 3 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
mammary gland epithelial cell
1
1
1
white adipose cell
1
See all biosamples
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