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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
247
candidate regulatory elements
217
gene expression
132
target gene predictions
123
chromatin state
67
accessible chromatin
58
differential activity
19
eQTL
19
variant allelic effects
15
binding sites
12
histone modifications
6
Fine-mapped variants
Date released
347
September, 2022
257
February, 2021
140
September, 2023
34
August, 2021
23
June, 2020
22
May, 2020
18
January, 2020
14
February, 2020
12
March, 2020
9
November, 2021
8
May, 2021
6
February, 2024
6
January, 2022
5
August, 2017
4
March, 2024
3
October, 2022
2
September, 2018
1
April, 2019
1
January, 2018
1
May, 2019
1
November, 2022
Available data
495
bed bed3+
275
tsv
118
bed bed9
87
txt
44
bigWig
3
bigBed bed9
Organism
915
Homo sapiens
Biosample type
519
tissue
316
primary cell
78
cell line
2
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
766
AMP
140
KPMP
9
ENCODE
Genome assembly (visualization)
626
hg19
171
GRCh38
2
hg18
BIOSAMPLE
TYPE
915 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
chromatin state
accessible chromatin
differential activity
eQTL
variant allelic effects
binding sites
histone modifications
Fine-mapped variants
tissue
kidney
29
7
14
16
10
1
1
1
2
large intestine
27
14
13
1
1
right kidney
20
10
10
1
1
renal cortex interstitium
20
9
9
1
1
renal pelvis
19
9
9
2
1
+ See 35 more…
primary cell
epithelial cell of proximal tubule
2
16
1
1
1
1
1
glomerular endothelial cell
2
14
1
1
2
1
glomerular visceral epithelial cell
2
5
1
1
2
kidney tubule cell
3
1
2
2
2
kidney glomerular epithelial cell
2
1
1
1
2
1
+ See 65 more…
cell line
HEK293
3
1
1
1
2
1
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
ACHN
2
1
1
1
+ See 17 more…
in vitro differentiated cells
renal cell carcinoma
1
white adipose cell
1
See all biosamples
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