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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
215
gene expression
207
candidate regulatory elements
105
target gene predictions
103
chromatin state
61
accessible chromatin
58
differential activity
19
variant allelic effects
18
eQTL
12
binding sites
10
histone modifications
6
Fine-mapped variants
Date released
297
September, 2022
229
February, 2021
140
September, 2023
34
August, 2021
22
May, 2020
18
January, 2020
18
June, 2020
14
February, 2020
11
March, 2020
5
January, 2022
5
November, 2021
4
May, 2021
3
February, 2024
3
October, 2022
2
August, 2017
2
March, 2024
2
September, 2018
1
April, 2019
1
January, 2018
1
May, 2019
1
November, 2022
Available data
414
bed bed3+
273
tsv
101
bed bed9
87
txt
43
bigWig
3
bigBed bed9
Organism
814
Homo sapiens
Biosample type
445
tissue
320
primary cell
47
cell line
2
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
669
AMP
140
KPMP
5
ENCODE
Genome assembly (visualization)
528
hg19
147
GRCh38
2
hg18
BIOSAMPLE
TYPE
814 results
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Clear Filters
gene expression
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
differential activity
variant allelic effects
eQTL
binding sites
histone modifications
Fine-mapped variants
tissue
kidney
7
29
14
16
10
1
1
1
2
placenta
26
15
14
1
1
1
2
right kidney
20
10
10
1
1
renal cortex interstitium
20
9
9
1
1
renal pelvis
19
9
9
2
1
+ See 24 more…
primary cell
epithelial cell of proximal tubule
16
2
1
1
1
1
1
glomerular endothelial cell
14
2
1
1
2
1
glomerular visceral epithelial cell
5
2
1
1
2
kidney tubule cell
1
3
2
2
2
fibroblast of villous mesenchyme
2
1
1
1
2
1
+ See 67 more…
cell line
HEK293
3
1
1
1
2
1
ACHN
2
1
1
1
Caki2
2
1
1
1
RCC 7860
2
1
1
1
G401
2
1
1
+ See 10 more…
in vitro differentiated cells
renal cell carcinoma
1
white adipose cell
1
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