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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
145
candidate regulatory elements
141
target gene predictions
74
chromatin state
29
accessible chromatin
25
gene expression
21
binding sites
17
histone modifications
15
eQTL
6
Fine-mapped variants
3
variant allelic effects
2
differential activity
Date released
203
September, 2022
122
February, 2021
56
February, 2024
18
June, 2020
15
May, 2021
14
August, 2021
10
March, 2020
8
November, 2021
6
August, 2017
5
February, 2020
5
January, 2022
4
January, 2020
3
May, 2020
2
March, 2024
2
October, 2022
2
September, 2018
1
January, 2018
1
November, 2022
Available data
364
bed bed3+
68
bed bed9
34
tsv
10
bigWig
1
bigBed bed9
Organism
478
Homo sapiens
Biosample type
253
tissue
164
cell line
31
in vitro differentiated cells
29
primary cell
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
470
AMP
8
ENCODE
Genome assembly (visualization)
444
hg19
146
GRCh38
2
hg18
BIOSAMPLE
TYPE
478 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
binding sites
histone modifications
eQTL
Fine-mapped variants
variant allelic effects
differential activity
tissue
large intestine
27
14
13
1
1
adipose tissue
7
8
6
2
3
1
4
1
sigmoid colon
10
7
5
1
subcutaneous adipose tissue
2
1
2
5
6
3
1
1
transverse colon
8
5
4
1
1
+ See 21 more…
cell line
H1-hESC
1
39
1
1
8
2
1
H9
7
8
1
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
H7-hESC
1
2
1
1
1
+ See 24 more…
in vitro differentiated cells
endodermal cell
4
2
2
mesodermal cell
4
1
1
1
trophoblast cell
2
2
1
ectodermal cell
2
1
1
cardiac mesoderm primordium
1
1
1
+ See 4 more…
primary cell
trophoblast cell
7
5
4
1
1
colon epithelial cell
3
3
primordial germ cell
1
1
mesenchymal stem cell of adipose
1
placental hematopoietic stem cell
1
+ See 1 more…
stem cell
H1-hESC
1
See all biosamples
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