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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
134
candidate regulatory elements
84
target gene predictions
74
chromatin state
55
accessible chromatin
51
gene expression
39
binding sites
22
eQTL
21
histone modifications
20
differential activity
19
variant allelic effects
15
Fine-mapped variants
3
caQTL
Date released
189
September, 2022
131
February, 2021
35
September, 2023
20
February, 2024
20
January, 2020
20
March, 2020
18
May, 2020
16
November, 2021
14
June, 2020
11
May, 2021
10
February, 2020
9
January, 2022
8
October, 2022
7
August, 2021
4
August, 2017
4
February, 2023
4
March, 2023
3
April, 2020
3
March, 2024
3
November, 2019
2
October, 2019
2
September, 2018
1
January, 2018
1
May, 2019
1
November, 2022
Available data
359
bed bed3+
88
tsv
70
bed bed9
41
bigWig
9
bigBed bed9
2
txt
Organism
537
Homo sapiens
Biosample type
252
primary cell
193
tissue
82
cell line
10
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
483
AMP
35
KPMP
16
ENCODE
3
LungMap
Genome assembly (visualization)
450
hg19
153
GRCh38
2
hg18
BIOSAMPLE
TYPE
537 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
binding sites
eQTL
histone modifications
differential activity
variant allelic effects
Fine-mapped variants
caQTL
primary cell
endothelial cell of umbilical vein
6
4
5
2
2
1
foreskin keratinocyte
11
4
4
keratinocyte
3
5
3
2
1
2
1
endothelial cell of hepatic sinusoid
6
4
6
foreskin fibroblast
6
2
1
1
4
2
+ See 38 more…
tissue
adipose tissue
7
8
6
2
3
1
4
1
coronary artery
3
3
3
3
1
2
2
3
1
subcutaneous adipose tissue
2
1
2
5
6
1
1
3
tibial artery
3
2
3
3
1
2
2
3
omental fat pad
5
2
2
2
2
2
3
+ See 19 more…
cell line
GM23248
2
1
1
1
1
1
RPMI7951
2
1
1
1
SK-MEL-5
2
1
1
1
iPS DF 19.11
2
2
1
iPS DF 19.7
2
1
1
+ See 20 more…
in vitro differentiated cells
foreskin keratinocyte
1
1
1
iPS DF 4.7 Cell Line
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
skin fibroblast
1
white adipose cell
1
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