Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
49
candidate regulatory elements
35
target gene predictions
25
chromatin state
20
accessible chromatin
4
eQTL
3
binding sites
3
gene expression
1
histone modifications
variant allelic effects
Date released
75
September, 2022
35
February, 2021
12
November, 2021
5
June, 2020
4
January, 2022
3
March, 2024
3
May, 2021
2
March, 2020
1
October, 2022
Available data
108
bed bed3+
25
bed bed9
15
bigWig
3
tsv
Organism
140
Homo sapiens
Biosample type
119
tissue
14
primary cell
7
cell line
Organ
908
epithelium
636
kidney
449
brain
444
connective tissue
368
musculature of body
310
lung
286
intestine
266
pancreas
251
vasculature
245
heart
236
limb
218
bodily fluid
215
embryo
207
blood
203
skin of body
195
blood vessel
174
large intestine
152
liver
146
extraembryonic component
117
stomach
107
eye
89
bone element
86
adipose tissue
86
mammary gland
84
small intestine
83
uterus
77
prostate gland
73
placenta
72
adrenal gland
71
artery
64
penis
62
lymph node
61
ureter
50
gonad
49
thymus
43
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
nerve
23
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
128
AMP
12
ENCODE
Genome assembly (visualization)
133
hg19
49
GRCh38
annotation_type!
variant allelic effects
BIOSAMPLE
TYPE
140 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
eQTL
binding sites
gene expression
histone modifications
tissue
adrenal gland
28
17
14
1
1
1
ovary
8
6
4
1
1
1
testis
7
3
3
1
1
1
1
1
femur
2
1
1
arm bone
1
1
1
+ See 9 more…
primary cell
cortical cell of adrenal gland
2
3
luteal cell
1
1
type I cell of adrenal cortex
1
1
type II cell of adrenal cortex
1
1
Leydig cell
1
+ See 2 more…
cell line
NT2-D1 cell
1
1
1
1
2
NT2/D1
1
See all biosamples
Download