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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
248
gene expression
207
accessible chromatin
127
target gene predictions
107
candidate regulatory elements
89
differential activity
59
chromatin state
43
variant allelic effects
37
binding sites
24
histone modifications
8
eQTL
6
Fine-mapped variants
4
caQTL
Date released
188
February, 2021
163
September, 2022
155
September, 2023
127
November, 2021
76
February, 2024
36
March, 2023
24
June, 2020
23
August, 2021
21
May, 2021
20
January, 2021
18
May, 2020
17
January, 2020
15
November, 2022
14
February, 2023
12
February, 2020
11
March, 2020
7
April, 2020
7
October, 2022
6
August, 2018
5
October, 2019
3
August, 2017
3
January, 2022
2
March, 2024
2
May, 2022
2
November, 2019
1
July, 2020
1
May, 2019
Available data
548
bed bed3+
325
tsv
180
bigWig
78
txt
56
bed bed9
14
bigBed narrowPeak
6
csv
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
959
Homo sapiens
Biosample type
830
primary cell
103
tissue
cell line
26
in vitro differentiated cells
Organ
906
epithelium
611
kidney
427
connective tissue
389
brain
358
musculature of body
255
intestine
255
vasculature
246
heart
243
pancreas
237
limb
215
lung
198
blood vessel
143
extraembryonic component
140
large intestine
134
skin of body
128
liver
119
stomach
99
eye
88
embryo
86
adipose tissue
84
small intestine
73
adrenal gland
71
artery
70
placenta
64
ureter
51
mammary gland
49
penis
49
thymus
45
esophagus
43
gonad
40
spinal cord
36
bone element
34
spleen
25
nerve
25
prostate gland
23
ovary
23
thyroid gland
21
vein
19
lymphatic vessel
19
testis
18
lymphoid tissue
18
skeleton
18
uterus
16
bronchus
15
mouth
13
bodily fluid
13
bone marrow
13
breast
12
blood
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
650
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
Genome assembly (visualization)
613
hg19
256
GRCh38
biosample_type!
cell line
BIOSAMPLE
TYPE
959 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
variant allelic effects
binding sites
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
3
1
1
2
1
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
1
2
+ See 148 more…
tissue
coronary artery
1
3
3
3
3
2
2
3
1
pigmented layer of retina
20
tibial artery
1
3
2
3
3
2
2
3
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
+ See 19 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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