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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
258
gene expression
232
accessible chromatin
186
target gene predictions
155
candidate regulatory elements
92
binding sites
92
differential activity
56
histone modifications
45
variant allelic effects
10
eQTL
6
Fine-mapped variants
5
chromatin state
4
caQTL
1
pQTL
Date released
280
February, 2021
163
September, 2022
155
September, 2023
127
November, 2021
104
February, 2024
40
May, 2021
39
June, 2020
38
March, 2023
26
August, 2021
26
October, 2022
20
January, 2021
19
May, 2020
16
January, 2020
15
February, 2023
15
November, 2022
12
February, 2020
12
March, 2020
7
April, 2020
6
August, 2018
5
August, 2017
5
October, 2019
3
January, 2022
3
March, 2024
3
November, 2019
2
May, 2022
1
July, 2020
Available data
772
bed bed3+
336
tsv
183
bigWig
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1142
Homo sapiens
Biosample type
794
primary cell
226
cell line
97
tissue
25
in vitro differentiated cells
Organ
899
epithelium
575
kidney
419
connective tissue
400
brain
304
musculature of body
264
pancreas
241
lung
234
intestine
234
vasculature
209
heart
194
limb
193
bodily fluid
188
embryo
184
blood
177
blood vessel
170
skin of body
142
liver
141
large intestine
113
extraembryonic component
100
eye
96
stomach
81
adipose tissue
79
uterus
75
bone element
73
mammary gland
67
artery
65
prostate gland
65
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
19
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
12
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
831
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
783
hg19
231
GRCh38
files.file_type!
bed bed9
BIOSAMPLE
TYPE
1142 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
binding sites
differential activity
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
chromatin state
caQTL
pQTL
primary cell
endothelial cell
9
15
7
2
1
2
1
2
hepatocyte
13
8
3
1
1
4
2
epithelial cell of proximal tubule
16
1
1
2
1
1
glomerular endothelial cell
14
2
1
2
1
pancreatic ductal cell
3
6
3
1
3
2
1
+ See 150 more…
cell line
K562
1
23
7
2
1
1
EndoC_BH1
8
8
1
3
1
GM12878
1
8
2
2
1
1
GM06990
1
1
2
2
1
GM19240
1
2
1
2
1
+ See 38 more…
tissue
pigmented layer of retina
20
coronary artery
1
3
3
3
2
2
3
1
tibial artery
1
3
2
3
2
2
3
breast epithelium
1
3
5
esophagus squamous epithelium
1
2
6
+ See 22 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
foreskin keratinocyte
1
1
1
hepatocyte
1
2
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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