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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
98
accessible chromatin
58
gene expression
51
candidate regulatory elements
41
target gene predictions
37
binding sites
28
eQTL
28
histone modifications
20
variant allelic effects
16
differential activity
15
Fine-mapped variants
10
chromatin state
4
caQTL
2
pQTL
Date released
September, 2022
130
February, 2021
50
November, 2021
24
June, 2020
22
September, 2023
19
May, 2021
18
February, 2024
18
March, 2020
15
January, 2020
15
May, 2020
14
February, 2020
13
October, 2022
11
August, 2021
10
January, 2022
7
August, 2017
7
March, 2023
7
November, 2022
4
February, 2023
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
November, 2019
2
October, 2019
2
September, 2018
1
August, 2018
1
January, 2018
1
June, 2021
1
May, 2019
Available data
289
bed bed3+
86
tsv
62
bigWig
7
txt
4
bigBed bed9
3
bed bed9
1
bigBed narrowPeak
Organism
408
Homo sapiens
Biosample type
224
primary cell
116
tissue
38
in vitro differentiated cells
29
cell line
1
stem cell
Organ
798
epithelium
427
kidney
340
connective tissue
286
brain
233
pancreas
191
vasculature
171
musculature of body
147
heart
144
blood vessel
143
bodily fluid
138
blood
134
embryo
125
intestine
110
liver
106
limb
102
skin of body
101
lung
82
eye
76
large intestine
71
uterus
65
adipose tissue
54
artery
50
stomach
47
bone element
47
extraembryonic component
45
mammary gland
39
prostate gland
38
lymph node
34
penis
31
adrenal gland
27
small intestine
26
gonad
25
placenta
25
ureter
24
esophagus
19
spinal cord
17
vein
16
nerve
16
spleen
16
thymus
15
lymphatic vessel
14
testis
13
pituitary gland
11
ovary
11
thyroid gland
10
bone marrow
10
bronchus
9
lymphoid tissue
9
skeleton
7
breast
7
mouth
5
trachea
4
tongue
4
urinary bladder
4
vagina
1
nose
1
pericardium
Project
327
AMP
50
ENCODE
20
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
318
hg19
108
GRCh38
2
hg18
month_released!
September, 2022
BIOSAMPLE
TYPE
408 results
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Clear Filters
accessible chromatin
gene expression
candidate regulatory elements
target gene predictions
binding sites
eQTL
histone modifications
variant allelic effects
differential activity
Fine-mapped variants
chromatin state
caQTL
pQTL
primary cell
fibroblast
16
4
1
2
6
pericyte cell
10
9
osteoblast
5
2
1
1
3
2
foreskin fibroblast
1
5
1
4
2
pancreatic stellate cell
2
2
1
3
+ See 48 more…
tissue
subcutaneous adipose tissue
2
5
2
6
1
1
3
1
coronary artery
3
1
1
1
2
2
3
1
1
adipose tissue
2
3
1
2
1
4
1
tibial artery
3
1
1
2
2
3
1
omental fat pad
2
2
3
2
3
+ See 12 more…
in vitro differentiated cells
adipocyte
4
1
2
4
1
1
4
chondrocyte
5
mesenchymal stem cell
1
1
1
1
1
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
cell line
fibroblast of cardiac tissue
2
1
2
GM23248
1
1
1
1
smooth muscle cell of the coronary artery
1
1
1
1
spinal cord
1
2
adipose tissue derived mesenchymal stem cell
1
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
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