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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
73
accessible chromatin
55
gene expression
50
target gene predictions
35
differential activity
31
candidate regulatory elements
22
chromatin state
18
eQTL
13
variant allelic effects
11
binding sites
11
histone modifications
8
Fine-mapped variants
2
caQTL
2
sQTL
2
variant to gene
Date released
59
September, 2022
47
March, 2023
45
February, 2021
35
May, 2021
25
February, 2024
20
January, 2021
18
November, 2021
12
March, 2020
8
August, 2021
8
May, 2020
7
August, 2018
6
January, 2020
6
January, 2022
6
June, 2020
6
October, 2019
5
February, 2020
5
September, 2023
4
February, 2023
3
August, 2017
3
November, 2019
1
April, 2019
1
January, 2018
1
June, 2021
1
May, 2019
1
October, 2022
Available data
195
bed bed3+
87
tsv
64
bigWig
18
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
bigBed bed9
3
csv
3
xls
Organism
333
Homo sapiens
Biosample type
155
primary cell
137
tissue
38
cell line
3
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
288
AMP
20
T1D
18
ENCODE
5
KPMP
2
community
Genome assembly (visualization)
229
hg19
79
GRCh38
organ_slims!
limb
BIOSAMPLE
TYPE
333 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
differential activity
candidate regulatory elements
chromatin state
eQTL
variant allelic effects
binding sites
histone modifications
Fine-mapped variants
caQTL
sQTL
variant to gene
primary cell
pancreatic ductal cell
6
3
3
3
1
1
2
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
3
4
3
1
+ See 18 more…
tissue
islet of Langerhans
6
11
1
3
13
1
2
1
2
2
2
body of pancreas
2
5
8
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
coronary artery
3
1
3
3
3
2
2
3
1
endocrine pancreas
4
7
4
+ See 9 more…
cell line
EndoC_BH1
8
8
1
3
1
Panc1
2
2
1
smooth muscle cell of the coronary artery
1
1
1
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 2 more…
in vitro differentiated cells
pancreatic ductal cell
3
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