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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
146
candidate regulatory elements
102
target gene predictions
84
chromatin state
56
accessible chromatin
35
gene expression
27
histone modifications
25
binding sites
16
eQTL
11
variant allelic effects
9
Fine-mapped variants
6
differential activity
3
caQTL
Date released
231
September, 2022
112
February, 2021
35
February, 2024
24
November, 2021
18
June, 2020
18
March, 2020
11
May, 2021
10
August, 2021
8
May, 2020
7
August, 2017
7
January, 2020
7
January, 2022
6
February, 2020
5
September, 2023
4
March, 2023
3
February, 2023
3
March, 2024
3
November, 2019
3
October, 2022
2
May, 2022
1
July, 2020
1
May, 2019
1
September, 2018
Available data
375
bed bed3+
77
bed bed9
47
tsv
43
bigWig
3
bigBed bed9
3
csv
1
bam
Organism
520
Homo sapiens
Biosample type
332
tissue
115
primary cell
66
cell line
7
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
491
AMP
24
ENCODE
5
KPMP
Genome assembly (visualization)
467
hg19
167
GRCh38
2
hg18
BIOSAMPLE
TYPE
520 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
histone modifications
binding sites
eQTL
variant allelic effects
Fine-mapped variants
differential activity
caQTL
tissue
small intestine
29
17
15
1
1
large intestine
27
14
13
1
1
liver
13
10
9
4
1
2
1
7
1
1
sigmoid colon
10
7
5
1
coronary artery
3
3
3
3
1
2
2
3
1
+ See 21 more…
primary cell
hepatocyte
1
3
1
8
13
4
1
2
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
1
1
1
3
1
1
1
fibroblast of pulmonary artery
2
1
1
1
1
2
pulmonary artery endothelial cell
2
1
1
1
1
1
+ See 13 more…
cell line
HepG2
2
3
2
2
5
3
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HuH-7
1
1
1
1
1
1
+ See 8 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
See all biosamples
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