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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
86
target gene predictions
80
candidate regulatory elements
65
binding sites
52
chromatin state
47
accessible chromatin
44
histone modifications
33
gene expression
15
eQTL
9
Fine-mapped variants
8
variant allelic effects
6
differential activity
3
caQTL
1
pQTL
Date released
142
September, 2022
115
February, 2021
57
February, 2024
21
October, 2022
20
June, 2020
16
March, 2020
13
August, 2021
9
May, 2021
8
May, 2020
7
January, 2020
6
February, 2020
5
August, 2017
5
November, 2021
5
September, 2023
4
January, 2022
4
March, 2023
3
February, 2023
3
November, 2019
2
May, 2022
1
July, 2020
1
March, 2024
1
May, 2019
1
September, 2018
Available data
337
bed bed3+
47
bed bed9
45
tsv
32
bigWig
3
bigBed bed9
3
csv
1
bam
Organism
449
Homo sapiens
Biosample type
237
cell line
104
tissue
101
primary cell
7
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
439
AMP
5
ENCODE
5
KPMP
Genome assembly (visualization)
401
hg19
141
GRCh38
2
hg18
BIOSAMPLE
TYPE
449 results
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Clear Filters
target gene predictions
candidate regulatory elements
binding sites
chromatin state
accessible chromatin
histone modifications
gene expression
eQTL
Fine-mapped variants
variant allelic effects
differential activity
caQTL
pQTL
cell line
K562
23
7
2
7
1
1
HepG2
3
2
3
2
2
5
GM12878
8
2
2
2
1
1
GM06990
1
2
2
1
1
1
GM19240
2
1
2
1
1
1
+ See 31 more…
tissue
liver
10
13
1
9
4
2
1
7
1
1
coronary artery
3
3
3
3
1
2
3
2
1
tibial artery
2
3
3
3
1
2
3
2
right lobe of liver
1
2
1
1
1
3
blood
2
+ See 4 more…
primary cell
hepatocyte
3
1
1
1
8
4
13
2
endothelial cell of hepatic sinusoid
6
6
4
hepatic stellate cell
1
1
1
3
1
1
1
fibroblast of pulmonary artery
1
2
2
1
1
1
pulmonary artery endothelial cell
1
2
1
1
1
1
+ See 8 more…
in vitro differentiated cells
hepatocyte
1
2
1
hepatocyte(AFP)
3
See all biosamples
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