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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
102
accessible chromatin
92
candidate regulatory elements
87
target gene predictions
60
gene expression
57
chromatin state
37
binding sites
30
histone modifications
26
eQTL
20
variant allelic effects
18
differential activity
12
Fine-mapped variants
4
caQTL
2
pQTL
Date released
144
September, 2022
126
February, 2021
53
November, 2021
27
September, 2023
23
June, 2020
18
February, 2024
18
May, 2021
15
May, 2020
14
January, 2020
14
March, 2020
13
February, 2020
12
October, 2022
11
August, 2021
9
January, 2022
7
August, 2017
7
March, 2023
7
November, 2022
4
April, 2020
4
February, 2023
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
November, 2019
2
October, 2019
2
September, 2018
1
August, 2018
1
January, 2018
1
June, 2021
1
May, 2019
Available data
382
bed bed3+
86
tsv
67
bigWig
50
bed bed9
7
txt
4
bigBed bed9
1
bigBed narrowPeak
Organism
547
Homo sapiens
Biosample type
321
primary cell
137
tissue
52
in vitro differentiated cells
37
cell line
stem cell
Organ
949
epithelium
652
kidney
465
brain
459
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
214
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
457
AMP
53
ENCODE
25
KPMP
4
ITG
4
LungMap
2
T1D
2
community
Genome assembly (visualization)
454
hg19
154
GRCh38
2
hg18
biosample_type!
stem cell
BIOSAMPLE
TYPE
547 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
gene expression
chromatin state
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
4
1
2
6
pericyte cell
10
1
10
1
osteoblast
5
2
2
2
1
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
1
6
2
1
4
2
+ See 53 more…
tissue
adipose tissue
2
7
8
3
6
1
4
1
coronary artery
3
3
3
1
3
2
2
3
1
subcutaneous adipose tissue
2
2
5
1
6
1
1
3
tibial artery
3
3
2
1
3
2
2
3
omental fat pad
2
5
2
2
2
2
3
+ See 10 more…
in vitro differentiated cells
adipocyte
4
4
6
1
6
1
1
mesenchymal stem cell
1
3
3
2
1
1
chondrocyte
5
dermis microvascular lymphatic vessel endothelial cell
1
1
fibroblast
1
1
+ See 9 more…
cell line
GM23248
1
2
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
smooth muscle cell of the coronary artery
1
1
1
1
foreskin fibroblast
1
1
1
+ See 9 more…
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