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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
85
target gene predictions
47
candidate regulatory elements
27
chromatin state
22
binding sites
21
accessible chromatin
12
histone modifications
10
gene expression
6
Fine-mapped variants
6
eQTL
5
variant allelic effects
2
caQTL
2
differential activity
Date released
75
September, 2022
53
February, 2021
52
February, 2024
9
June, 2020
8
November, 2021
6
March, 2020
6
May, 2021
5
May, 2020
5
October, 2022
5
September, 2023
4
February, 2020
4
January, 2020
4
January, 2022
3
February, 2023
2
March, 2024
2
November, 2019
1
August, 2017
1
May, 2019
Available data
195
bed bed3+
26
bed bed9
18
tsv
13
bigWig
2
bigBed bed9
Organism
245
Homo sapiens
Biosample type
105
cell line
80
primary cell
57
tissue
3
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
232
AMP
8
ENCODE
5
KPMP
Genome assembly (visualization)
227
hg19
106
GRCh38
BIOSAMPLE
TYPE
245 results
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target gene predictions
candidate regulatory elements
chromatin state
binding sites
accessible chromatin
histone modifications
gene expression
Fine-mapped variants
eQTL
variant allelic effects
caQTL
differential activity
cell line
HeLa-S3
55
5
3
1
MCF-7
6
9
5
3
1
2
T47D
2
3
2
smooth muscle cell of the coronary artery
1
1
1
1
MCF 10A
3
+ See 1 more…
primary cell
mammary gland epithelial cell
4
3
3
1
1
1
mammary epithelial cell
1
3
1
4
1
fibroblast of mammary gland
1
2
1
2
1
1
fibroblast of pulmonary artery
1
2
1
2
1
1
myoepithelial cell of mammary gland
2
4
2
+ See 8 more…
tissue
coronary artery
3
3
3
3
1
3
2
2
1
tibial artery
2
3
3
3
1
3
2
2
uterus
2
3
1
1
1
1
endometrium cancer
1
1
mammary gland
1
1
+ See 4 more…
in vitro differentiated cells
mammary gland epithelial cell
1
1
1
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