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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
76
accessible chromatin
53
gene expression
52
target gene predictions
35
differential activity
34
candidate regulatory elements
25
chromatin state
20
eQTL
15
variant allelic effects
11
Fine-mapped variants
11
binding sites
11
histone modifications
2
caQTL
2
sQTL
2
variant to gene
Date released
65
September, 2022
47
March, 2023
46
February, 2021
35
May, 2021
22
February, 2024
20
January, 2021
18
November, 2021
15
March, 2020
11
May, 2020
8
August, 2021
8
January, 2020
7
August, 2018
7
January, 2022
7
June, 2020
6
February, 2020
6
October, 2019
5
September, 2023
4
February, 2023
4
November, 2019
3
August, 2017
1
April, 2019
1
January, 2018
1
June, 2021
1
May, 2019
1
October, 2022
Available data
205
bed bed3+
89
tsv
66
bigWig
21
bed bed9
14
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
349
Homo sapiens
Biosample type
156
tissue
155
primary cell
38
cell line
in vitro differentiated cells
Organ
923
epithelium
651
kidney
462
brain
408
connective tissue
373
musculature of body
311
lung
289
intestine
274
pancreas
264
vasculature
254
heart
244
limb
218
bodily fluid
207
blood
204
blood vessel
195
skin of body
185
embryo
174
large intestine
149
liver
141
extraembryonic component
119
stomach
103
eye
89
bone element
88
adipose tissue
84
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
ureter
62
lymph node
58
penis
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
1
pericardium
Project
304
AMP
20
T1D
18
ENCODE
5
KPMP
2
community
Genome assembly (visualization)
246
hg19
89
GRCh38
biosample_type!
in vitro differentiated cells
BIOSAMPLE
TYPE
349 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
differential activity
candidate regulatory elements
chromatin state
eQTL
variant allelic effects
Fine-mapped variants
binding sites
histone modifications
caQTL
sQTL
variant to gene
tissue
islet of Langerhans
6
11
1
3
13
1
2
2
1
2
2
body of pancreas
2
5
8
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
coronary artery
3
1
3
3
3
2
2
3
1
tibial artery
3
1
2
3
3
2
2
3
+ See 10 more…
primary cell
pancreatic ductal cell
6
3
3
3
1
1
2
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
3
4
3
1
+ See 18 more…
cell line
EndoC_BH1
8
8
1
3
1
Panc1
2
2
1
smooth muscle cell of the coronary artery
1
1
1
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 2 more…
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