Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
75
accessible chromatin
56
gene expression
52
target gene predictions
34
candidate regulatory elements
34
differential activity
25
chromatin state
20
eQTL
15
variant allelic effects
11
Fine-mapped variants
11
binding sites
11
histone modifications
2
sQTL
2
variant to gene
Date released
65
September, 2022
47
March, 2023
46
February, 2021
35
May, 2021
25
February, 2024
20
January, 2021
18
November, 2021
15
March, 2020
11
May, 2020
8
August, 2021
8
January, 2020
7
August, 2018
7
January, 2022
7
June, 2020
6
February, 2020
6
October, 2019
5
September, 2023
February, 2023
4
November, 2019
3
August, 2017
1
April, 2019
1
January, 2018
1
June, 2021
1
May, 2019
1
October, 2022
Available data
202
bed bed3+
91
tsv
65
bigWig
21
bed bed9
14
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
348
Homo sapiens
Biosample type
154
primary cell
154
tissue
37
cell line
3
in vitro differentiated cells
Organ
937
epithelium
652
kidney
466
brain
457
connective tissue
375
musculature of body
311
lung
289
intestine
276
pancreas
262
vasculature
252
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
200
blood vessel
174
large intestine
156
liver
146
extraembryonic component
119
stomach
89
adipose tissue
89
bone element
87
mammary gland
85
eye
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
72
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
303
AMP
20
T1D
18
ENCODE
5
KPMP
2
community
Genome assembly (visualization)
245
hg19
86
GRCh38
month_released!
February, 2023
BIOSAMPLE
TYPE
348 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
gene expression
target gene predictions
candidate regulatory elements
differential activity
chromatin state
eQTL
variant allelic effects
Fine-mapped variants
binding sites
histone modifications
sQTL
variant to gene
primary cell
pancreatic ductal cell
6
3
3
3
1
1
2
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
3
4
3
1
+ See 18 more…
tissue
islet of Langerhans
6
11
1
3
13
1
2
2
1
2
2
body of pancreas
2
5
8
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
coronary artery
2
1
3
3
3
2
2
3
tibial artery
3
1
2
3
3
2
2
3
+ See 10 more…
cell line
EndoC_BH1
8
8
1
2
1
Panc1
2
2
1
smooth muscle cell of the coronary artery
1
1
1
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 2 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
Download