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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
80
candidate regulatory elements
78
accessible chromatin
77
target gene predictions
53
binding sites
29
histone modifications
5
variant allelic effects
4
chromatin state
2
eQTL
Date released
101
February, 2021
80
September, 2022
29
February, 2024
24
February, 2023
23
November, 2022
21
October, 2022
19
June, 2020
7
May, 2021
5
January, 2020
5
May, 2020
4
August, 2017
4
November, 2021
2
March, 2020
2
September, 2018
1
August, 2021
Available data
328
bed bed3+
41
bigWig
40
bed bed9
25
tsv
1
bigBed bed9
Organism
328
Homo sapiens
Biosample type
184
cell line
108
tissue
29
primary cell
7
in vitro differentiated cells
Organ
547
epithelium
330
connective tissue
309
brain
309
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
limb
173
heart
165
skin of body
163
vasculature
159
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
101
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
324
AMP
4
ENCODE
Genome assembly (visualization)
328
hg19
38
GRCh38
BIOSAMPLE
TYPE
328 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
binding sites
histone modifications
variant allelic effects
chromatin state
eQTL
cell line
K562
7
1
23
2
1
1
GM12878
2
1
8
2
1
1
GM06990
2
1
1
2
1
GM19240
1
1
2
2
1
HAP-1
2
1
2
1
1
+ See 28 more…
tissue
retina
6
23
3
1
1
1
adipose tissue
7
2
8
1
1
1
pigmented layer of retina
20
omental fat pad
5
2
2
eye
4
1
2
+ See 6 more…
primary cell
retinal pigment epithelial cell
2
3
1
2
1
peripheral blood mononuclear cell
4
1
1
iris pigment epithelial cell
2
1
1
fibroblast of the conjunctiva
2
1
peripheral blood stem cell
1
1
1
+ See 3 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
white adipose cell
1
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