Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
132
target gene predictions
121
candidate regulatory elements
100
accessible chromatin
76
binding sites
72
chromatin state
50
gene expression
49
histone modifications
21
eQTL
16
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
186
September, 2022
178
February, 2021
50
November, 2021
46
February, 2024
32
June, 2020
31
October, 2022
20
May, 2021
17
September, 2023
13
August, 2021
10
January, 2020
10
May, 2020
9
August, 2017
9
February, 2020
9
March, 2020
7
March, 2023
7
November, 2022
6
January, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
508
bed bed3+
64
tsv
63
bed bed9
55
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
661
Homo sapiens
Biosample type
286
primary cell
226
cell line
98
tissue
50
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
587
AMP
50
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
589
hg19
172
GRCh38
2
hg18
organ_slims!
bone marrow
BIOSAMPLE
TYPE
661 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
binding sites
chromatin state
gene expression
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
4
16
1
2
6
pericyte cell
10
1
10
1
osteoblast
2
2
5
3
1
2
2
fibroblast of lung
4
6
2
4
foreskin fibroblast
2
6
1
4
1
2
+ See 44 more…
cell line
K562
23
7
1
2
7
1
GM12878
8
2
1
2
2
1
GM06990
1
2
1
2
1
1
GM19240
2
1
1
2
1
1
HAP-1
2
2
1
1
1
1
+ See 35 more…
tissue
adipose tissue
8
7
2
1
6
3
4
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
omental fat pad
2
5
2
2
2
2
3
subcutaneous abdominal adipose tissue
5
1
cartilage tissue
1
2
2
+ See 8 more…
in vitro differentiated cells
adipocyte
6
4
4
1
6
1
1
mesenchymal stem cell
3
3
1
1
2
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download