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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
232
gene expression
202
accessible chromatin
163
target gene predictions
117
candidate regulatory elements
79
differential activity
72
binding sites
64
chromatin state
47
histone modifications
37
variant allelic effects
5
eQTL
2
caQTL
Date released
239
February, 2021
184
September, 2022
130
September, 2023
121
November, 2021
90
February, 2024
37
May, 2021
34
March, 2023
33
June, 2020
25
August, 2021
23
October, 2022
20
January, 2021
15
November, 2022
12
February, 2023
10
May, 2020
9
January, 2020
8
February, 2020
6
August, 2018
5
March, 2020
5
October, 2019
4
April, 2020
4
August, 2017
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
642
bed bed3+
291
tsv
158
bigWig
78
txt
60
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1020
Homo sapiens
Biosample type
702
primary cell
231
cell line
63
tissue
24
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
743
AMP
130
KPMP
121
ENCODE
20
T1D
4
LungMap
2
community
Genome assembly (visualization)
707
hg19
247
GRCh38
organ_slims!
vasculature
BIOSAMPLE
TYPE
1020 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
binding sites
chromatin state
histone modifications
variant allelic effects
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
1
2
1
2
hepatocyte
13
8
3
1
1
1
4
2
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
foreskin keratinocyte
4
11
4
+ See 127 more…
cell line
K562
1
23
7
2
7
1
EndoC_BH1
8
8
1
3
1
GM12878
1
8
2
2
2
1
GM06990
1
1
2
2
1
1
GM19240
1
2
1
2
1
1
+ See 31 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
blood
2
kidney epithelium
1
1
+ See 16 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 3 more…
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