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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
110
candidate regulatory elements
100
target gene predictions
73
chromatin state
48
binding sites
34
accessible chromatin
29
histone modifications
18
gene expression
8
variant allelic effects
6
Fine-mapped variants
6
eQTL
Date released
171
September, 2022
112
February, 2021
33
February, 2024
19
October, 2022
17
June, 2020
12
March, 2020
10
August, 2021
10
January, 2020
10
November, 2021
9
May, 2020
8
February, 2020
6
April, 2019
6
May, 2021
2
August, 2017
2
January, 2022
2
November, 2019
2
October, 2019
1
March, 2024
Available data
336
bed bed3+
66
bed bed9
24
tsv
17
bigWig
9
bigBed bed9
Organism
432
Homo sapiens
Biosample type
200
cell line
196
tissue
35
primary cell
1
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
422
AMP
10
ENCODE
Genome assembly (visualization)
412
hg19
130
GRCh38
organ_slims!
stomach
artery
BIOSAMPLE
TYPE
432 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
accessible chromatin
histone modifications
gene expression
variant allelic effects
Fine-mapped variants
eQTL
cell line
K562
7
23
7
2
1
1
GM12878
2
8
2
2
1
1
GM06990
2
1
1
2
1
1
GM19240
1
2
1
2
1
1
HAP-1
2
2
1
1
1
1
+ See 24 more…
tissue
heart
37
20
21
1
5
1
3
2
heart left ventricle
11
7
8
3
1
1
2
1
heart right ventricle
6
5
5
1
1
1
right atrium auricular region
3
2
2
3
2
2
3
2
left cardiac atrium
2
1
6
1
1
1
+ See 10 more…
primary cell
fibroblast of cardiac tissue
3
4
3
2
peripheral blood mononuclear cell
4
1
1
cardiac fibroblast
3
endocardial cell
1
2
peripheral blood stem cell
1
1
1
+ See 5 more…
in vitro differentiated cells
cardiac fibroblast
1
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